Information for 8-CMATKAGCCCCCA (Motif 8)

A G T C G T C A C T G A A G C T A C T G C G T A A C T G A G T C A G T C G T A C A G T C A G T C C G T A
Reverse Opposite:
G C A T A C T G C T A G C A T G A C T G A C T G A G T C A C G T G T A C C T G A A G C T A C G T A C T G
p-value:1e-14
log p-value:-3.231e+01
Information Content per bp:1.794
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.88%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets39.1 +/- 22.5bp
Average Position of motif in Background63.9 +/- 8.1bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer

Match Rank:1
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CMATKAGCCCCCA
BCMATTAG------
 A C G T A G T C G T C A C T G A A G C T A C T G C G T A A C T G A G T C A G T C G T A C A G T C A G T C C G T A
A C T G A G T C G T C A G T C A A C G T A G C T C G T A T C A G A C G T A C G T A C G T A C G T A C G T A C G T

EN2/MA0642.1/Jaspar

Match Rank:2
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CMATKAGCCCCCA
CCCAATTAGC-----
 A C G T A C G T A G T C G T C A C T G A A G C T A C T G C G T A A C T G A G T C A G T C G T A C A G T C A G T C C G T A
T A G C A T G C A G T C T G C A T G C A A C G T A G C T C T G A T A C G A T G C A C G T A C G T A C G T A C G T A C G T

RHOXF1/MA0719.1/Jaspar

Match Rank:3
Score:0.60
Offset:2
Orientation:forward strand
Alignment:CMATKAGCCCCCA
--ATAATCCC---
 A G T C G T C A C T G A A G C T A C T G C G T A A C T G A G T C A G T C G T A C A G T C A G T C C G T A
A C G T A C G T G C T A C G A T C T G A C G T A A C G T A G T C A G T C G T A C A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:4
Score:0.60
Offset:4
Orientation:forward strand
Alignment:CMATKAGCCCCCA
----CAGCC----
 A G T C G T C A C T G A A G C T A C T G C G T A A C T G A G T C A G T C G T A C A G T C A G T C C G T A
A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T

PB0025.1_Glis2_1/Jaspar

Match Rank:5
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CMATKAGCCCCCA---
TATCGACCCCCCACAG
 A G T C G T C A C T G A A G C T A C T G C G T A A C T G A G T C A G T C G T A C A G T C A G T C C G T A A C G T A C G T A C G T
G A C T G C T A G C A T T A G C A C T G T G C A A G T C A G T C G A T C G A T C G A T C G A T C T G C A A G T C C T G A C A T G

BARX1/MA0875.1/Jaspar

Match Rank:6
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CMATKAGCCCCCA
GCAATTAG------
 A C G T A G T C G T C A C T G A A G C T A C T G C G T A A C T G A G T C A G T C G T A C A G T C A G T C C G T A
T C A G G A T C T G C A T G C A A C G T A C G T C G T A T C A G A C G T A C G T A C G T A C G T A C G T A C G T

VENTX/MA0724.1/Jaspar

Match Rank:7
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--CMATKAGCCCCCA
ACCGATTAG------
 A C G T A C G T A G T C G T C A C T G A A G C T A C T G C G T A A C T G A G T C A G T C G T A C A G T C A G T C C G T A
C G T A T G A C G A T C T C A G G T C A A C G T A C G T C G T A C T A G A C G T A C G T A C G T A C G T A C G T A C G T

LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer

Match Rank:8
Score:0.56
Offset:4
Orientation:forward strand
Alignment:CMATKAGCCCCCA-
----AAGACCCYYN
 A G T C G T C A C T G A A G C T A C T G C G T A A C T G A G T C A G T C G T A C A G T C A G T C C G T A A C G T
A C G T A C G T A C G T A C G T T C G A T G C A A C T G G T C A A G T C A G T C A G T C A G T C A G C T T G A C

LBX2/MA0699.1/Jaspar

Match Rank:9
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--CMATKAGCCCCCA
GCCAATTAGC-----
 A C G T A C G T A G T C G T C A C T G A A G C T A C T G C G T A A C T G A G T C A G T C G T A C A G T C A G T C C G T A
T C A G A G T C G A T C T G C A T G C A A C G T A C G T C G T A C T A G T A G C A C G T A C G T A C G T A C G T A C G T

Barhl1/MA0877.1/Jaspar

Match Rank:10
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--CMATKAGCCCCCA
NNCAATTANN-----
 A C G T A C G T A G T C G T C A C T G A A G C T A C T G C G T A A C T G A G T C A G T C G T A C A G T C A G T C C G T A
T C G A T A C G G A T C T C G A G C T A G A C T G C A T C G T A C T A G T A G C A C G T A C G T A C G T A C G T A C G T