Information for 17-CAMAGSMTGMTGT (Motif 22)

A G T C C G T A G T A C C G T A A C T G A T G C G T C A A C G T A C T G G T A C C G A T A C T G A C G T
Reverse Opposite:
C G T A A G T C C G T A A C T G A G T C C G T A A C G T A T C G A G T C C G A T A C T G A C G T C T A G
p-value:1e-7
log p-value:-1.677e+01
Information Content per bp:1.870
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.50%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets53.2 +/- 10.0bp
Average Position of motif in Background31.9 +/- 20.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0207.1_Zic3_2/Jaspar

Match Rank:1
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---CAMAGSMTGMTGT
GAGCACAGCAGGACA-
 A C G T A C G T A C G T A G T C C G T A G T A C C G T A A C T G A T G C G T C A A C G T A C T G G T A C C G A T A C T G A C G T
C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:2
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---CAMAGSMTGMTGT
CCACACAGCAGGAGA-
 A C G T A C G T A C G T A G T C C G T A G T A C C G T A A C T G A T G C G T C A A C G T A C T G G T A C C G A T A C T G A C G T
A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:3
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CAMAGSMTGMTGT
DCTCAGCAGG----
 A C G T A G T C C G T A G T A C C G T A A C T G A T G C G T C A A C G T A C T G G T A C C G A T A C T G A C G T
C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G A C G T A C G T A C G T A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:4
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---CAMAGSMTGMTGT
CCACACAGCAGGAGA-
 A C G T A C G T A C G T A G T C C G T A G T A C C G T A A C T G A T G C G T C A A C G T A C T G G T A C C G A T A C T G A C G T
G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A A C G T

PH0158.1_Rhox11_2/Jaspar

Match Rank:5
Score:0.58
Offset:3
Orientation:forward strand
Alignment:CAMAGSMTGMTGT-------
---AGGACGCTGTAAAGGGA
 A G T C C G T A G T A C C G T A A C T G A T G C G T C A A C G T A C T G G T A C C G A T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G T A T C A G C A T G G T C A G A T C C T A G T A G C C A G T C T A G G A C T G C T A C G T A G C T A C T A G T A C G T C A G G C T A

Rhox11/MA0629.1/Jaspar

Match Rank:6
Score:0.57
Offset:3
Orientation:forward strand
Alignment:CAMAGSMTGMTGT-------
---AAGACGCTGTAAAGCGA
 A G T C C G T A G T A C C G T A A C T G A T G C G T C A A C G T A C T G G T A C C G A T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G T A T G C A C A T G T G C A G A T C C T A G T A G C C A G T C T A G G A C T C G T A G C T A G C T A C T A G T A G C T C A G G C T A

PH0157.1_Rhox11_1/Jaspar

Match Rank:7
Score:0.57
Offset:3
Orientation:forward strand
Alignment:CAMAGSMTGMTGT-------
---AAGACGCTGTAAAGCGA
 A G T C C G T A G T A C C G T A A C T G A T G C G T C A A C G T A C T G G T A C C G A T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G T A T G C A C A T G T G C A G A T C C T A G T A G C C A G T C T A G G A C T C G T A G C T A G C T A C T A G T A G C T C A G G C T A

POL009.1_DCE_S_II/Jaspar

Match Rank:8
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:CAMAGSMTGMTGT
CACAGN-------
 A G T C C G T A G T A C C G T A A C T G A T G C G T C A A C G T A C T G G T A C C G A T A C T G A C G T
T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

JUN/MA0488.1/Jaspar

Match Rank:9
Score:0.56
Offset:3
Orientation:forward strand
Alignment:CAMAGSMTGMTGT---
---AAGATGATGTCAT
 A G T C C G T A G T A C C G T A A C T G A T G C G T C A A C G T A C T G G T A C C G A T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G T A C G T A C T A G T C G A A C G T A C T G C G T A A C G T A T C G G A C T G T A C C G T A A G C T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:10
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CAMAGSMTGMTGT
CACAGCAGGGGG-
 A G T C C G T A G T A C C G T A A C T G A T G C G T C A A C G T A C T G G T A C C G A T A C T G A C G T
T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G A C G T