Information for 5-CATTGACATA (Motif 8)

A G T C C G T A A C G T A C G T A C T G T G C A A G T C C G T A A C G T C G T A
Reverse Opposite:
C G A T G T C A A C G T A C T G A C G T A G T C T C G A G T C A C G A T C T A G
p-value:1e-10
log p-value:-2.392e+01
Information Content per bp:1.845
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.65%
Number of Background Sequences with motif59.5
Percentage of Background Sequences with motif0.12%
Average Position of motif in Targets49.2 +/- 22.3bp
Average Position of motif in Background53.5 +/- 28.9bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POU3F4/MA0789.1/Jaspar

Match Rank:1
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:CATTGACATA
-ATTTGCATA
 A G T C C G T A A C G T A C G T A C T G T G C A A G T C C G T A A C G T C G T A
A C G T G C T A G C A T C G A T G C A T T C A G G T A C C G T A G A C T C G T A

POU5F1B/MA0792.1/Jaspar

Match Rank:2
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:CATTGACATA
-ATTTGCATA
 A G T C C G T A A C G T A C G T A C T G T G C A A G T C C G T A A C G T C G T A
A C G T G C T A G C A T G C A T G C A T T C A G G T A C T C G A G C A T C T G A

POU3F1/MA0786.1/Jaspar

Match Rank:3
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-CATTGACATA-
TAATTTGCATAA
 A C G T A G T C C G T A A C G T A C G T A C T G T G C A A G T C C G T A A C G T C G T A A C G T
C G A T G T C A G C T A G C A T G C A T G C A T T C A G G T A C C T G A G A C T C G T A G C T A

POU3F2/MA0787.1/Jaspar

Match Rank:4
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-CATTGACATA-
TAATTTGCATAA
 A C G T A G T C C G T A A C G T A C G T A C T G T G C A A G T C C G T A A C G T C G T A A C G T
C G A T T G C A G C T A C G A T G C A T C G A T T C A G G T A C C T G A A G C T C G T A G C T A

POU2F1/MA0785.1/Jaspar

Match Rank:5
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:CATTGACATA--
AATTTGCATANT
 A G T C C G T A A C G T A C G T A C T G T G C A A G T C C G T A A C G T C G T A A C G T A C G T
G T C A G C T A G C A T G A C T G C A T T C A G G T A C T C G A G C A T C T G A G C A T C G A T

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:6
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--CATTGACATA
BTVATTWGCATA
 A C G T A C G T A G T C C G T A A C G T A C G T A C T G T G C A A G T C C G T A A C G T C G T A
A G T C C A G T T G C A G T C A A C G T A G C T C G A T T C A G G T A C C G T A A C G T C T G A

Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer

Match Rank:7
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--CATTGACATA
CTCATTTGCATW
 A C G T A C G T A G T C C G T A A C G T A C G T A C T G T G C A A G T C C G T A A C G T C G T A
A G T C G C A T T G A C G T C A A C G T A G C T C G A T T C A G T G A C G C T A G C A T C G T A

MEIS1/MA0498.2/Jaspar

Match Rank:8
Score:0.70
Offset:2
Orientation:forward strand
Alignment:CATTGACATA
--TTGACAG-
 A G T C C G T A A C G T A C G T A C T G T G C A A G T C C G T A A C G T C G T A
A C G T A C G T G C A T G C A T A T C G T G C A A G T C C T G A C T A G A C G T

MEIS3/MA0775.1/Jaspar

Match Rank:9
Score:0.68
Offset:2
Orientation:forward strand
Alignment:CATTGACATA
--TTGACAGG
 A G T C C G T A A C G T A C G T A C T G T G C A A G T C C G T A A C G T C G T A
A C G T A C G T C G A T G C A T A T C G C T G A G A T C C T G A A C T G A T C G

POU1F1/MA0784.1/Jaspar

Match Rank:10
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--CATTGACATA--
CTAATTTGCATATT
 A C G T A C G T A G T C C G T A A C G T A C G T A C T G T G C A A G T C C G T A A C G T C G T A A C G T A C G T
G A T C G C A T T G C A G C T A C A G T G C A T C G A T T C A G G T A C C T G A G A C T G C T A G C A T G C A T