Information for 5-GCCCCCTTGCTGT (Motif 2)

A C T G A G T C A G T C A G T C A G T C A G T C A C G T C A G T A C T G A G T C A C G T A C T G A G C T
Reverse Opposite:
C T G A A G T C C G T A A C T G T A G C G C T A C G T A A C T G A C T G A C T G A C T G C T A G A G T C
p-value:1e-24
log p-value:-5.625e+01
Information Content per bp:1.897
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.27%
Number of Background Sequences with motif1.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets62.4 +/- 14.8bp
Average Position of motif in Background63.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

INSM1/MA0155.1/Jaspar

Match Rank:1
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-GCCCCCTTGCTGT
CGCCCCCTGACA--
 A C G T A C T G A G T C A G T C A G T C A G T C A G T C A C G T C A G T A C T G A G T C A C G T A C T G A G C T
G A T C C T A G T G A C A G T C A G T C A T G C A G T C C G A T C A T G T C G A G T A C G T C A A C G T A C G T

ZIC1/MA0696.1/Jaspar

Match Rank:2
Score:0.68
Offset:0
Orientation:forward strand
Alignment:GCCCCCTTGCTGT-
GACCCCCCGCTGTG
 A C T G A G T C A G T C A G T C A G T C A G T C A C G T C A G T A C T G A G T C A C G T A C T G A G C T A C G T
A C T G T C G A G T A C G T A C G T A C A G T C G T A C G A T C T C A G A G T C A C G T T C A G G A C T A C T G

PB0076.1_Sp4_1/Jaspar

Match Rank:3
Score:0.67
Offset:-6
Orientation:forward strand
Alignment:------GCCCCCTTGCTGT
GGTCCCGCCCCCTTCTC--
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A G T C A G T C A G T C A G T C A C G T C A G T A C T G A G T C A C G T A C T G A G C T
A C T G C A T G G A C T G T A C G T A C A G T C C T A G A G T C A T G C A G T C G T A C A G T C G A C T G A C T T A G C A G C T A G T C A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:4
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:GCCCCCTTGCTGT-
--CCCCCTGCTGTG
 A C T G A G T C A G T C A G T C A G T C A G T C A C G T C A G T A C T G A G T C A C G T A C T G A G C T A C G T
A C G T A C G T G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G

ZIC3/MA0697.1/Jaspar

Match Rank:5
Score:0.64
Offset:0
Orientation:forward strand
Alignment:GCCCCCTTGCTGT--
GACCCCCCGCTGCGC
 A C T G A G T C A G T C A G T C A G T C A G T C A C G T C A G T A C T G A G T C A C G T A C T G A G C T A C G T A C G T
A C T G T C G A G T A C G A T C G T A C A G T C A G T C A G T C T C A G A G T C A C G T C A T G G A T C C A T G G T A C

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.64
Offset:-7
Orientation:forward strand
Alignment:-------GCCCCCTTGCTGT
CNNBRGCGCCCCCTGSTGGC
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A G T C A G T C A G T C A G T C A C G T C A G T A C T G A G T C A C G T A C T G A G C T
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:7
Score:0.64
Offset:0
Orientation:forward strand
Alignment:GCCCCCTTGCTGT--
GGCCYCCTGCTGDGH
 A C T G A G T C A G T C A G T C A G T C A G T C A C G T C A G T A C T G A G T C A C G T A C T G A G C T A C G T A C G T
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

ZIC4/MA0751.1/Jaspar

Match Rank:8
Score:0.63
Offset:0
Orientation:forward strand
Alignment:GCCCCCTTGCTGT--
GACCCCCCGCTGTGC
 A C T G A G T C A G T C A G T C A G T C A G T C A C G T C A G T A C T G A G T C A C G T A C T G A G C T A C G T A C G T
A C T G T C G A G T A C G T A C G T A C G T A C G T A C G A T C C T A G A G T C C A G T C T A G G A C T A C T G G T A C

LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer

Match Rank:9
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GCCCCCTTGCTGT
AAGACCCYYN-----
 A C G T A C G T A C T G A G T C A G T C A G T C A G T C A G T C A C G T C A G T A C T G A G T C A C G T A C T G A G C T
T C G A T G C A A C T G G T C A A G T C A G T C A G T C A G T C A G C T T G A C A C G T A C G T A C G T A C G T A C G T

CTCF/MA0139.1/Jaspar

Match Rank:10
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----GCCCCCTTGCTGT--
TAGCGCCCCCTGGTGGCCA
 A C G T A C G T A C G T A C G T A C T G A G T C A G T C A G T C A G T C A G T C A C G T C A G T A C T G A G T C A C G T A C T G A G C T A C G T A C G T
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A