Information for 2-CTGCTCVRCAGGGAAA (Motif 6)

A G T C G A C T A C T G A T G C C G A T A T G C T A G C T C A G A T G C T C G A A C T G A T C G A C T G C G T A T C G A C T G A
Reverse Opposite:
A G C T A C G T A C G T A G T C A T G C A G T C A C G T A T C G A G T C A C T G A T C G C G T A A T C G A G T C C T G A A C T G
p-value:1e-13
log p-value:-3.082e+01
Information Content per bp:1.743
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.86%
Number of Background Sequences with motif4.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets51.9 +/- 19.6bp
Average Position of motif in Background43.3 +/- 20.0bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:1
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-CTGCTCVRCAGGGAAA
GGGGCTYGKCTGGGA--
 A C G T A G T C G A C T A C T G A T G C C G A T A T G C T A G C T C A G A T G C T C G A A C T G A T C G A C T G C G T A T C G A C T G A
C T A G C A T G C A T G T A C G A G T C G C A T A G C T C T A G A C G T A G T C G A C T A C T G A C T G A C T G T C G A A C G T A C G T

EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer

Match Rank:2
Score:0.61
Offset:2
Orientation:forward strand
Alignment:CTGCTCVRCAGGGAAA
--NGTCCCNNGGGA--
 A G T C G A C T A C T G A T G C C G A T A T G C T A G C T C A G A T G C T C G A A C T G A T C G A C T G C G T A T C G A C T G A
A C G T A C G T C T A G A T C G G A C T A G T C A G T C A G T C G A C T C T G A A C T G C T A G A C T G C T G A A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:3
Score:0.59
Offset:3
Orientation:forward strand
Alignment:CTGCTCVRCAGGGAAA
---CACAGCAGGGGG-
 A G T C G A C T A C T G A T G C C G A T A T G C T A G C T C A G A T G C T C G A A C T G A T C G A C T G C G T A T C G A C T G A
A C G T A C G T A C G T T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G A C G T

GATA:SCL(Zf,bHLH)/Ter119-SCL-ChIP-Seq(GSE18720)/Homer

Match Rank:4
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---CTGCTCVRCAGGGAAA-
CNGCTGNNGNNNNCAGATAA
 A C G T A C G T A C G T A G T C G A C T A C T G A T G C C G A T A T G C T A G C T C A G A T G C T C G A A C T G A T C G A C T G C G T A T C G A C T G A A C G T
T G A C C T A G A C T G T A G C C G A T A C T G A T G C C A T G A T C G A T C G A T C G T A G C C T G A T A G C G C T A A C T G C G T A A G C T C G T A C T G A

E2F6/MA0471.1/Jaspar

Match Rank:5
Score:0.57
Offset:6
Orientation:forward strand
Alignment:CTGCTCVRCAGGGAAA-
------GGGCGGGAAGG
 A G T C G A C T A C T G A T G C C G A T A T G C T A G C T C A G A T G C T C G A A C T G A T C G A C T G C G T A T C G A C T G A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T A G T C A G A C T G G T A C C T A G A C T G T A C G C G T A C T G A T C A G T C A G

GATA1::TAL1/MA0140.2/Jaspar

Match Rank:6
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:CTGCTCVRCAGGGAAA--
CTGNNNNNNNCAGATAAG
 A G T C G A C T A C T G A T G C C G A T A T G C T A G C T C A G A T G C T C G A A C T G A T C G A C T G C G T A T C G A C T G A A C G T A C G T
T A G C C G A T A C T G A G T C C G A T A G T C A T G C C A G T A G T C T G C A T A G C C G T A A C T G C G T A A C G T C G T A C T G A A C T G

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:7
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:CTGCTCVRCAGGGAAA-
--DCHCAGCAGGRGGCC
 A G T C G A C T A C T G A T G C C G A T A T G C T A G C T C A G A T G C T C G A A C T G A T C G A C T G C G T A T C G A C T G A A C G T
A C G T A C G T C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.54
Offset:7
Orientation:forward strand
Alignment:CTGCTCVRCAGGGAAA-
-------GGCGGGAARN
 A G T C G A C T A C T G A T G C C G A T A T G C T A G C T C A G A T G C T C G A A C T G A T C G A C T G C G T A T C G A C T G A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A C G G T A C A T C G A C T G T A C G T C G A C T G A T C G A A T C G

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:9
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:CTGCTCVRCAGGGAAA
--DCTCAGCAGG----
 A G T C G A C T A C T G A T G C C G A T A T G C T A G C T C A G A T G C T C G A A C T G A T C G A C T G C G T A T C G A C T G A
A C G T A C G T C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G A C G T A C G T A C G T A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:10
Score:0.53
Offset:0
Orientation:forward strand
Alignment:CTGCTCVRCAGGGAAA
CCACACAGCAGGAGA-
 A G T C G A C T A C T G A T G C C G A T A T G C T A G C T C A G A T G C T C G A A C T G A T C G A C T G C G T A T C G A C T G A
A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A A C G T