Information for 12-TCACTAAATCCAA (Motif 27)

A G C T A G T C G T C A A G T C A G C T C G T A C G T A C T G A A C G T A G T C A G T C C G T A C T G A
Reverse Opposite:
A G C T A C G T A C T G A C T G C G T A A G C T A C G T A C G T C T G A A C T G A C G T A C T G C T G A
p-value:1e-7
log p-value:-1.744e+01
Information Content per bp:1.928
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.54%
Number of Background Sequences with motif4.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets32.6 +/- 13.4bp
Average Position of motif in Background31.1 +/- 7.4bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PITX3/MA0714.1/Jaspar

Match Rank:1
Score:0.55
Offset:3
Orientation:forward strand
Alignment:TCACTAAATCCAA
---CTTAATCCC-
 A G C T A G T C G T C A A G T C A G C T C G T A C G T A C T G A A C G T A G T C A G T C C G T A C T G A
A C G T A C G T A C G T T A G C G A C T G C A T C T G A C T G A C A G T G T A C A G T C G A T C A C G T

PB0134.1_Hnf4a_2/Jaspar

Match Rank:2
Score:0.55
Offset:0
Orientation:forward strand
Alignment:TCACTAAATCCAA---
GGCAAAAGTCCAATAA
 A G C T A G T C G T C A A G T C A G C T C G T A C G T A C T G A A C G T A G T C A G T C C G T A C T G A A C G T A C G T A C G T
A C G T A C G T G A T C G T A C C G T A C T G A C T G A A C T G A C G T G T A C A G T C C T G A G T C A C G A T G T C A G C A T

PB0197.1_Zfp105_2/Jaspar

Match Rank:3
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----TCACTAAATCCAA
ATGGTTCAATAATTTTG-
 A C G T A C G T A C G T A C G T A C G T A G C T A G T C G T C A A G T C A G C T C G T A C G T A C T G A A C G T A G T C A G T C C G T A C T G A
C T A G A G C T C A T G T A C G A C G T A G C T T G A C T G C A T G C A A G C T T C G A C G T A A G C T C A G T A G C T A C G T C T A G A C G T

Pitx1/MA0682.1/Jaspar

Match Rank:4
Score:0.55
Offset:4
Orientation:forward strand
Alignment:TCACTAAATCCAA
----TTAATCCC-
 A G C T A G T C G T C A A G T C A G C T C G T A C G T A C T G A A C G T A G T C A G T C C G T A C T G A
A C G T A C G T A C G T A C G T G A C T G C A T T C G A C G T A C A G T G A T C G A T C G T A C A C G T

Gfi1/MA0038.1/Jaspar

Match Rank:5
Score:0.55
Offset:4
Orientation:forward strand
Alignment:TCACTAAATCCAA-
----CAAATCACTG
 A G C T A G T C G T C A A G T C A G C T C G T A C G T A C T G A A C G T A G T C A G T C C G T A C T G A A C G T
A C G T A C G T A C G T A C G T A G T C T G C A C G T A C G T A C A G T G T A C G C T A T A G C G C A T T A C G

FOXH1/MA0479.1/Jaspar

Match Rank:6
Score:0.55
Offset:3
Orientation:forward strand
Alignment:TCACTAAATCCAA-
---TCCAATCCACA
 A G C T A G T C G T C A A G T C A G C T C G T A C G T A C T G A A C G T A G T C A G T C C G T A C T G A A C G T
A C G T A C G T A C G T A G C T A G T C T A G C C G T A C G T A A C G T G T A C G T A C C G T A A G T C C G T A

Hoxc9/MA0485.1/Jaspar

Match Rank:7
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-TCACTAAATCCAA
GGCCATAAATCAC-
 A C G T A G C T A G T C G T C A A G T C A G C T C G T A C G T A C T G A A C G T A G T C A G T C C G T A C T G A
C T A G T A C G G A T C G T A C C T G A A G C T T G C A C G T A G T C A C G A T G A T C G C T A A G T C A C G T

PB0171.1_Sox18_2/Jaspar

Match Rank:8
Score:0.54
Offset:0
Orientation:forward strand
Alignment:TCACTAAATCCAA---
GGACTGAATTCATGCC
 A G C T A G T C G T C A A G T C A G C T C G T A C G T A C T G A A C G T A G T C A G T C C G T A C T G A A C G T A C G T A C G T
C T A G A C T G C T G A A T G C A G C T C T A G G T C A C T G A G A C T C A G T G A T C T C G A C G A T C T A G G T A C T G A C

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:TCACTAAATCCAA---
----SSAATCCACANN
 A G C T A G T C G T C A A G T C A G C T C G T A C G T A C T G A A C G T A G T C A G T C C G T A C T G A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T G C T A G C C T G A C G T A A C G T G T A C G T A C C T G A A G T C C G T A C T G A G T A C

RHOXF1/MA0719.1/Jaspar

Match Rank:10
Score:0.54
Offset:4
Orientation:forward strand
Alignment:TCACTAAATCCAA
----ATAATCCC-
 A G C T A G T C G T C A A G T C A G C T C G T A C G T A C T G A A C G T A G T C A G T C C G T A C T G A
A C G T A C G T A C G T A C G T G C T A C G A T C T G A C G T A A C G T A G T C A G T C G T A C A C G T