Information for 10-CTCCCTCCCGGHGTTT (Motif 24)

A G T C A C G T A T G C A G T C A G T C A G C T G T A C A G T C A G T C A C T G A T C G G A C T A C T G C G A T A C G T A G C T
Reverse Opposite:
C T G A C G T A C G T A A G T C C G T A A T G C A G T C A C T G A C T G A C T G C T G A A C T G C T A G A T C G C G T A A C T G
p-value:1e-8
log p-value:-1.880e+01
Information Content per bp:1.836
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.43%
Number of Background Sequences with motif0.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets40.8 +/- 21.9bp
Average Position of motif in Background87.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZIC4/MA0751.1/Jaspar

Match Rank:1
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CTCCCTCCCGGHGTTT
-GACCCCCCGCTGTGC
 A G T C A C G T A T G C A G T C A G T C A G C T G T A C A G T C A G T C A C T G A T C G G A C T A C T G C G A T A C G T A G C T
A C G T A C T G T C G A G T A C G T A C G T A C G T A C G T A C G A T C C T A G A G T C C A G T C T A G G A C T A C T G G T A C

E2F6/MA0471.1/Jaspar

Match Rank:2
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CTCCCTCCCGGHGTTT
NCTTCCCGCCC-------
 A C G T A C G T A G T C A C G T A T G C A G T C A G T C A G C T G T A C A G T C A G T C A C T G A T C G G A C T A C T G C G A T A C G T A G C T
A G T C A G T C A G C T A C G T A T G C A G T C A G T C C A T G A G T C A G T C G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZIC3/MA0697.1/Jaspar

Match Rank:3
Score:0.57
Offset:1
Orientation:forward strand
Alignment:CTCCCTCCCGGHGTTT
-GACCCCCCGCTGCGC
 A G T C A C G T A T G C A G T C A G T C A G C T G T A C A G T C A G T C A C T G A T C G G A C T A C T G C G A T A C G T A G C T
A C G T A C T G T C G A G T A C G A T C G T A C A G T C A G T C A G T C T C A G A G T C A C G T C A T G G A T C C A T G G T A C

PB0204.1_Zfp740_2/Jaspar

Match Rank:4
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CTCCCTCCCGGHGTTT
AAATTCCCCCCGGAAGT-
 A C G T A C G T A G T C A C G T A T G C A G T C A G T C A G C T G T A C A G T C A G T C A C T G A T C G G A C T A C T G C G A T A C G T A G C T
C T G A C T G A C T G A C A G T G C A T G A T C G A T C A G T C A G T C A T G C A T G C T A C G A T C G C T G A C T G A T C A G A G C T A C G T

PB0101.1_Zic1_1/Jaspar

Match Rank:5
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:CTCCCTCCCGGHGTTT
--CCCCCCCGGGGGNN
 A G T C A C G T A T G C A G T C A G T C A G C T G T A C A G T C A G T C A C T G A T C G G A C T A C T G C G A T A C G T A G C T
A C G T A C G T T A G C T G A C G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G C A G T T A C G

PB0103.1_Zic3_1/Jaspar

Match Rank:6
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CTCCCTCCCGGHGTTT
-NCCCCCCCGGGGGGN
 A G T C A C G T A T G C A G T C A G T C A G C T G T A C A G T C A G T C A C T G A T C G G A C T A C T G C G A T A C G T A G C T
A C G T T C G A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G T A C G A C T G C A T G C A T G C A T G T A C G

ZIC1/MA0696.1/Jaspar

Match Rank:7
Score:0.56
Offset:1
Orientation:forward strand
Alignment:CTCCCTCCCGGHGTTT
-GACCCCCCGCTGTG-
 A G T C A C G T A T G C A G T C A G T C A G C T G T A C A G T C A G T C A C T G A T C G G A C T A C T G C G A T A C G T A G C T
A C G T A C T G T C G A G T A C G T A C G T A C A G T C G T A C G A T C T C A G A G T C A C G T T C A G G A C T A C T G A C G T

POL011.1_XCPE1/Jaspar

Match Rank:8
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-CTCCCTCCCGGHGTTT
GGTCCCGCCC-------
 A C G T A G T C A C G T A T G C A G T C A G T C A G C T G T A C A G T C A G T C A C T G A T C G G A C T A C T G C G A T A C G T A G C T
A C T G A T C G A C G T A G T C A G T C A G T C C T A G A G T C A T G C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0102.1_Zic2_1/Jaspar

Match Rank:9
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:CTCCCTCCCGGHGTTT
-ACCCCCCCGGGGGGN
 A G T C A C G T A T G C A G T C A G T C A G C T G T A C A G T C A G T C A C T G A T C G G A C T A C T G C G A T A C G T A G C T
A C G T T G C A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G A T C G A C T G C A T G C A T G C A T G T A C G

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:10
Score:0.52
Offset:1
Orientation:forward strand
Alignment:CTCCCTCCCGGHGTTT
-TGCCCCCGGGCA---
 A G T C A C G T A T G C A G T C A G T C A G C T G T A C A G T C A G T C A C T G A T C G G A C T A C T G C G A T A C G T A G C T
A C G T G A C T T A C G T A G C A G T C A G T C A G T C T G A C T C A G T C A G A T C G A T G C C T G A A C G T A C G T A C G T