Information for 1-GAGRGGGAYGGAGCTG (Motif 1)

A C T G G T C A C T A G C T G A A C T G C A T G C A T G C T G A A G T C C T A G A T C G G T C A A C T G A T G C G A C T A C T G
Reverse Opposite:
A G T C C G T A A T C G A G T C A C G T A T G C A G T C T C A G A G C T G A T C G T A C A G T C A G C T A G T C C A G T G T A C
p-value:1e-20
log p-value:-4.618e+01
Information Content per bp:1.749
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif1.61%
Number of Background Sequences with motif15.1
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets61.7 +/- 21.9bp
Average Position of motif in Background58.5 +/- 32.7bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0114.1_Egr1_2/Jaspar

Match Rank:1
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----GAGRGGGAYGGAGCTG
TGCGGAGTGGGACTGG----
 A C G T A C G T A C G T A C G T A C T G G T C A C T A G C T G A A C T G C A T G C A T G C T G A A G T C C T A G A T C G G T C A A C T G A T G C G A C T A C T G
A C G T A C T G G A T C A C T G C T A G T C G A C T A G C A G T C T A G C A T G C A T G C G T A G A T C G C A T C T A G A C T G A C G T A C G T A C G T A C G T

POL013.1_MED-1/Jaspar

Match Rank:2
Score:0.57
Offset:8
Orientation:reverse strand
Alignment:GAGRGGGAYGGAGCTG
--------CGGAGC--
 A C T G G T C A C T A G C T G A A C T G C A T G C A T G C T G A A G T C C T A G A T C G G T C A A C T G A T G C G A C T A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T

Zfp281(Zf)/ES-Zfp281-ChIP-Seq(GSE81042)/Homer

Match Rank:3
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GAGRGGGAYGGAGCTG
GTGGGGGAGGGG----
 A C T G G T C A C T A G C T G A A C T G C A T G C A T G C T G A A G T C C T A G A T C G G T C A A C T G A T G C G A C T A C T G
C T A G G C A T A C T G A C T G C T A G A C T G A C T G G C T A C A T G A C T G C A T G A T C G A C G T A C G T A C G T A C G T

EGR1/MA0162.2/Jaspar

Match Rank:4
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GAGRGGGAYGGAGCTG
GGCGGGGGCGGGGG---
 A C G T A C T G G T C A C T A G C T G A A C T G C A T G C A T G C T G A A G T C C T A G A T C G G T C A A C T G A T G C G A C T A C T G
A C T G T A C G G T A C C T A G C A T G T C A G C T A G A C T G G A T C C T A G C A T G T C A G C T A G T A C G A C G T A C G T A C G T

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:5
Score:0.56
Offset:2
Orientation:forward strand
Alignment:GAGRGGGAYGGAGCTG
--RGKGGGCGGAGC--
 A C T G G T C A C T A G C T G A A C T G C A T G C A T G C T G A A G T C C T A G A T C G G T C A A C T G A T G C G A C T A C T G
A C G T A C G T C T G A T C A G C A G T C T A G A C T G C T A G G A T C A T C G A C T G C T G A T C A G G A T C A C G T A C G T

PB0097.1_Zfp281_1/Jaspar

Match Rank:6
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-GAGRGGGAYGGAGCTG
GGGGGGGGGGGGGGA--
 A C G T A C T G G T C A C T A G C T G A A C T G C A T G C A T G C T G A A G T C C T A G A T C G G T C A A C T G A T G C G A C T A C T G
A C T G C T A G C A T G C A T G A C T G C A T G C A T G C T A G C T A G C A T G A T C G C A T G C A T G T C A G G C T A A C G T A C G T

MZF1(var.2)/MA0057.1/Jaspar

Match Rank:7
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-GAGRGGGAYGGAGCTG
GGAGGGGGAA-------
 A C G T A C T G G T C A C T A G C T G A A C T G C A T G C A T G C T G A A G T C C T A G A T C G G T C A A C T G A T G C G A C T A C T G
A C T G C A G T G T C A A C T G A C T G A T C G A C T G C A T G C T G A C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--GAGRGGGAYGGAGCTG--
SMCAGTCWGAKGGAGGAGGC
 A C G T A C G T A C T G G T C A C T A G C T G A A C T G C A T G C A T G C T G A A G T C C T A G A T C G G T C A A C T G A T G C G A C T A C T G A C G T A C G T
A T C G T G A C A T G C C T G A T C A G G A C T A G T C C G A T T C A G T C G A C A T G C T A G C T A G C G T A C T A G C T A G C T G A C T A G C T A G A T G C

PB0124.1_Gabpa_2/Jaspar

Match Rank:9
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--GAGRGGGAYGGAGCTG
NNNNGGGGGAAGANGG--
 A C G T A C G T A C T G G T C A C T A G C T G A A C T G C A T G C A T G C T G A A G T C C T A G A T C G G T C A A C T G A T G C G A C T A C T G
C T A G A C G T A T C G T C G A C T A G C A T G T A C G C T A G C T A G C T G A C G T A C T A G T G C A G A T C C T A G A C T G A C G T A C G T

Sp1(Zf)/Promoter/Homer

Match Rank:10
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:GAGRGGGAYGGAGCTG
---GGGGGCGGGGCC-
 A C T G G T C A C T A G C T G A A C T G C A T G C A T G C T G A A G T C C T A G A T C G G T C A A C T G A T G C G A C T A C T G
A C G T A C G T A C G T T C A G C A T G C T A G A C T G A C T G A G T C A C T G A C T G C T A G T A C G A G T C A T G C A C G T