Information for 5-CTCGGGGTTTTCAGCC (Motif 13)

G T A C A C G T A T G C A C T G A C T G A C T G A T C G A G C T A C G T A C G T A C G T A G T C T C G A A C T G A G T C A G T C
Reverse Opposite:
A C T G A C T G A G T C A C G T A C T G C G T A C G T A C G T A C T G A A T G C G T A C A G T C A G T C A T C G C G T A A C T G
p-value:1e-8
log p-value:-1.888e+01
Information Content per bp:1.870
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.52%
Number of Background Sequences with motif4.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets61.7 +/- 28.3bp
Average Position of motif in Background31.9 +/- 4.9bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MF0003.1_REL_class/Jaspar

Match Rank:1
Score:0.64
Offset:3
Orientation:forward strand
Alignment:CTCGGGGTTTTCAGCC
---GGGGATTTCC---
 G T A C A C G T A T G C A C T G A C T G A C T G A T C G A G C T A C G T A C G T A C G T A G T C T C G A A C T G A G T C A G T C
A C G T A C G T A C G T A T C G A C T G C A T G C T A G G C T A C G A T A G C T G A C T G A T C G T A C A C G T A C G T A C G T

REL/MA0101.1/Jaspar

Match Rank:2
Score:0.61
Offset:3
Orientation:forward strand
Alignment:CTCGGGGTTTTCAGCC
---GGGGATTTCC---
 G T A C A C G T A T G C A C T G A C T G A C T G A T C G A G C T A C G T A C G T A C G T A G T C T C G A A C T G A G T C A G T C
A C G T A C G T A C G T A T C G A C T G C A T G C T A G G T C A C G A T C G A T C G A T A G T C G T A C A C G T A C G T A C G T

RELA/MA0107.1/Jaspar

Match Rank:3
Score:0.59
Offset:3
Orientation:forward strand
Alignment:CTCGGGGTTTTCAGCC
---GGGAATTTCC---
 G T A C A C G T A T G C A C T G A C T G A C T G A T C G A G C T A C G T A C G T A C G T A G T C T C G A A C T G A G T C A G T C
A C G T A C G T A C G T A T C G A C T G A C T G C T G A T C G A C G A T A C G T A G C T A G T C A G T C A C G T A C G T A C G T

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:4
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:CTCGGGGTTTTCAGCC
---GGGAATTTCC---
 G T A C A C G T A T G C A C T G A C T G A C T G A T C G A G C T A C G T A C G T A C G T A G T C T C G A A C T G A G T C A G T C
A C G T A C G T A C G T A C T G C T A G A C T G C T G A T C G A C G A T A G C T C G A T G T A C G T A C A C G T A C G T A C G T

E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.55
Offset:6
Orientation:reverse strand
Alignment:CTCGGGGTTTTCAGCC
------DTTTCCCGCC
 G T A C A C G T A T G C A C T G A C T G A C T G A T C G A G C T A C G T A C G T A C G T A G T C T C G A A C T G A G T C A G T C
A C G T A C G T A C G T A C G T A C G T A C G T C T G A G C A T G A C T C A G T A T G C A T G C A T G C A C T G A T G C A T G C

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:6
Score:0.55
Offset:1
Orientation:forward strand
Alignment:CTCGGGGTTTTCAGCC
-NGGGGATTTCCC---
 G T A C A C G T A T G C A C T G A C T G A C T G A T C G A G C T A C G T A C G T A C G T A G T C T C G A A C T G A G T C A G T C
A C G T C G T A C A T G C A T G A C T G C T A G T C G A G C A T C G A T A G C T A G T C G A T C G T A C A C G T A C G T A C G T

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:7
Score:0.54
Offset:8
Orientation:reverse strand
Alignment:CTCGGGGTTTTCAGCC--
--------TTCCCGCCWG
 G T A C A C G T A T G C A C T G A C T G A C T G A T C G A G C T A C G T A C G T A C G T A G T C T C G A A C T G A G T C A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T A C G T A T G C A T G C A G T C A C T G A G T C A T G C G C T A A T C G

E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer

Match Rank:8
Score:0.52
Offset:7
Orientation:reverse strand
Alignment:CTCGGGGTTTTCAGCC---
-------TTTCCCGCCMAV
 G T A C A C G T A T G C A C T G A C T G A C T G A T C G A G C T A C G T A C G T A C G T A G T C T C G A A C T G A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T G A C T A C G T A T G C A T G C A G T C A C T G A T G C T A G C G T A C T G C A T G A C

E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer

Match Rank:9
Score:0.52
Offset:5
Orientation:forward strand
Alignment:CTCGGGGTTTTCAGCC-
-----VDTTTCCCGCCA
 G T A C A C G T A T G C A C T G A C T G A C T G A T C G A G C T A C G T A C G T A C G T A G T C T C G A A C T G A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T T A G C C G A T A C G T A G C T A G C T A G T C A T G C A G T C A C T G A T G C A T G C G C T A

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:10
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:CTCGGGGTTTTCAGCC
---GGGGATTCCCCC-
 G T A C A C G T A T G C A C T G A C T G A C T G A T C G A G C T A C G T A C G T A C G T A G T C T C G A A C T G A G T C A G T C
A C G T A C G T A C G T A C T G C T A G C A T G T C A G G C T A G A C T A G C T A G T C A G T C G A T C G A T C A G T C A C G T