Information for 2-CTGGCGGCCCAGG (Motif 2)

A G T C A C G T A C T G A C T G T A G C T C A G A C T G A T G C G T A C G T A C C G T A A C T G A C T G
Reverse Opposite:
A G T C A G T C C G A T A C T G A C T G A T C G A G T C A G T C A T C G A G T C A G T C G T C A A C T G
p-value:1e-14
log p-value:-3.303e+01
Information Content per bp:1.827
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.29%
Number of Background Sequences with motif18.8
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets52.1 +/- 21.4bp
Average Position of motif in Background41.0 +/- 23.5bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:1
Score:0.72
Offset:0
Orientation:forward strand
Alignment:CTGGCGGCCCAGG--
AAGGKGRCGCAGGCA
 A G T C A C G T A C T G A C T G T A G C T C A G A C T G A T G C G T A C G T A C C G T A A C T G A C T G A C G T A C G T
T G C A C G T A A C T G T C A G C A G T C A T G T C A G G A T C T A C G A G T C T G C A A C T G A C T G T G A C G T C A

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:CTGGCGGCCCAGG--
-----TGCCCAGNHW
 A G T C A C G T A C T G A C T G T A G C T C A G A C T G A T G C G T A C G T A C C G T A A C T G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A

PB0052.1_Plagl1_1/Jaspar

Match Rank:3
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--CTGGCGGCCCAGG-
NNNGGGGCGCCCCCNN
 A C G T A C G T A G T C A C G T A C T G A C T G T A G C T C A G A C T G A T G C G T A C G T A C C G T A A C T G A C T G A C G T
A T G C A G C T T G C A C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C G A T C C T G A T G C A

Zfx/MA0146.2/Jaspar

Match Rank:4
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:CTGGCGGCCCAGG----
---CAGGCCNNGGCCNN
 A G T C A C G T A C T G A C T G T A G C T C A G A C T G A T G C G T A C G T A C C G T A A C T G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

ZIC4/MA0751.1/Jaspar

Match Rank:5
Score:0.54
Offset:-6
Orientation:reverse strand
Alignment:------CTGGCGGCCCAGG
NCNCAGCGGGGGGTC----
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C T G A C T G T A G C T C A G A C T G A T G C G T A C G T A C C G T A A C T G A C T G
C A T G T G A C C T G A G A T C G T C A T C A G G A T C C T A G C A T G C A T G C A T G C A T G C A T G A G C T T G A C A C G T A C G T A C G T A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:6
Score:0.54
Offset:4
Orientation:forward strand
Alignment:CTGGCGGCCCAGG
----AGGCCTAG-
 A G T C A C G T A C T G A C T G T A G C T C A G A C T G A T G C G T A C G T A C C G T A A C T G A C T G
A C G T A C G T A C G T A C G T T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G A C G T

PLAG1/MA0163.1/Jaspar

Match Rank:7
Score:0.53
Offset:3
Orientation:forward strand
Alignment:CTGGCGGCCCAGG----
---GGGGCCCAAGGGGG
 A G T C A C G T A C T G A C T G T A G C T C A G A C T G A T G C G T A C G T A C C G T A A C T G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C T G C T A G A C T G A C T G A T G C A G T C G T A C C G T A T G C A C A T G A C T G A C T G A C T G C T A G

THAP1/MA0597.1/Jaspar

Match Rank:8
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--CTGGCGGCCCAGG
TNNGGGCAG------
 A C G T A C G T A G T C A C G T A C T G A C T G T A G C T C A G A C T G A T G C G T A C G T A C C G T A A C T G A C T G
C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G A C G T A C G T A C G T A C G T A C G T A C G T

ZIC1/MA0696.1/Jaspar

Match Rank:9
Score:0.51
Offset:-5
Orientation:reverse strand
Alignment:-----CTGGCGGCCCAGG
CACAGCGGGGGGTC----
 A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C T G A C T G T A G C T C A G A C T G A T G C G T A C G T A C C G T A A C T G A C T G
T G A C C T G A A G T C T G C A T C A G A G T C C T A G C A T G T C A G C A T G C A T G C A T G A G C T T G A C A C G T A C G T A C G T A C G T

ZNF692(Zf)/HEK293-ZNF692.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:CTGGCGGCCCAGG
--TGGGGCCCAC-
 A G T C A C G T A C T G A C T G T A G C T C A G A C T G A T G C G T A C G T A C C G T A A C T G A C T G
A C G T A C G T G A C T C T A G A C T G A C T G T A C G A G T C A G T C A G T C C T G A A T G C A C G T