Information for 3-CACKGAGAAS (Motif 18)

A G T C C G T A G A T C A C T G T C A G C G T A C T A G C G T A C G T A A T G C
Reverse Opposite:
A T C G A C G T A C G T A G T C A C G T A G T C G T A C C T A G A C G T A C T G
p-value:1e-8
log p-value:-1.883e+01
Information Content per bp:1.836
Number of Target Sequences with motif34.0
Percentage of Target Sequences with motif3.67%
Number of Background Sequences with motif548.4
Percentage of Background Sequences with motif1.15%
Average Position of motif in Targets52.8 +/- 21.5bp
Average Position of motif in Background49.7 +/- 28.9bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0139.1_Irf5_2/Jaspar

Match Rank:1
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CACKGAGAAS---
TTGACCGAGAATTCC
 A C G T A C G T A G T C C G T A G A T C A C T G T C A G C G T A C T A G C G T A C G T A A T G C A C G T A C G T A C G T
A G C T G C A T C T A G C G T A G A C T G T A C C T A G C T G A A T C G C G T A C T G A G A C T G A C T A G T C T A G C

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:2
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---CACKGAGAAS
TBGCACGCAA---
 A C G T A C G T A C G T A G T C C G T A G A T C A C T G T C A G C G T A C T A G C G T A C G T A A T G C
G C A T A T C G C A T G G T A C G C T A A G T C T C A G T G A C G T C A T G C A A C G T A C G T A C G T

POL008.1_DCE_S_I/Jaspar

Match Rank:3
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:CACKGAGAAS-
-----NGAAGC
 A G T C C G T A G A T C A C T G T C A G C G T A C T A G C G T A C G T A A T G C A C G T
A C G T A C G T A C G T A C G T A C G T T A C G T A C G T G C A T C G A T A C G T G A C

PB0138.1_Irf4_2/Jaspar

Match Rank:4
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--CACKGAGAAS---
GNNACCGAGAATNNN
 A C G T A C G T A G T C C G T A G A T C A C T G T C A G C G T A C T A G C G T A C G T A A T G C A C G T A C G T A C G T
A T C G G T A C C T G A G C T A A G T C A G T C C A T G T C G A C A T G G C T A C T G A C G A T T C G A A T G C A G C T

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:5
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:CACKGAGAAS
CACGCA----
 A G T C C G T A G A T C A C T G T C A G C G T A C T A G C G T A C G T A A T G C
A G T C C G T A G T A C C T A G G T A C C T G A A C G T A C G T A C G T A C G T

ELF5(ETS)/T47D-ELF5-ChIP-Seq(GSE30407)/Homer

Match Rank:6
Score:0.55
Offset:1
Orientation:forward strand
Alignment:CACKGAGAAS-
-ACVAGGAAGT
 A G T C C G T A G A T C A C T G T C A G C G T A C T A G C G T A C G T A A T G C A C G T
A C G T G C T A A G T C T A C G T G C A A T C G T C A G G C T A T C G A T C A G A G C T

PB0022.1_Gata5_1/Jaspar

Match Rank:7
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--CACKGAGAAS-----
TAAACTGATAAGAAGAT
 A C G T A C G T A G T C C G T A G A T C A C T G T C A G C G T A C T A G C G T A C G T A A T G C A C G T A C G T A C G T A C G T A C G T
G C A T C G T A C G T A C T G A A G T C G C A T A C T G C G T A C G A T G C T A C G T A T A C G T C G A T C G A C A T G C G T A C A G T

NFYA/MA0060.2/Jaspar

Match Rank:8
Score:0.53
Offset:-5
Orientation:reverse strand
Alignment:-----CACKGAGAAS---
TGGACCAATCAGCACTCT
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A G A T C A C T G T C A G C G T A C T A G C G T A C G T A A T G C A C G T A C G T A C G T
A G C T A T C G T C A G C T G A A T G C A G T C C G T A T C G A G A C T T A G C T C G A T C A G T G A C C T G A A T G C A C G T G T A C C G A T

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:CACKGAGAAS--
--GGGAGGACNG
 A G T C C G T A G A T C A C T G T C A G C G T A C T A G C G T A C G T A A T G C A C G T A C G T
A C G T A C G T C T A G A C T G A C T G C G T A A C T G A T C G C G T A A T G C A G C T T A C G

SpiB(ETS)/OCILY3-SPIB-ChIP-Seq(GSE56857)/Homer

Match Rank:10
Score:0.52
Offset:0
Orientation:forward strand
Alignment:CACKGAGAAS--
AAAGRGGAAGTG
 A G T C C G T A G A T C A C T G T C A G C G T A C T A G C G T A C G T A A T G C A C G T A C G T
C G T A C T G A C G T A C T A G T C G A C T A G A C T G C G T A C G T A T A C G A G C T A T C G