Information for 1-GTGCTGGCATCCA (Motif 1)

C T A G A C G T A T C G G T A C A C G T A C T G T A C G A G T C C G T A A C G T A G T C A G T C C G T A
Reverse Opposite:
A C G T A C T G A C T G G T C A G C A T A C T G A G T C G T A C G T C A A C T G A T G C G T C A A G T C
p-value:1e-15
log p-value:-3.597e+01
Information Content per bp:1.806
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.29%
Number of Background Sequences with motif14.1
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets39.0 +/- 19.8bp
Average Position of motif in Background45.5 +/- 28.9bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:1
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:GTGCTGGCATCCA-
TGGCAGNCTGCCAG
 C T A G A C G T A T C G G T A C A C G T A C T G T A C G A G T C C G T A A C G T A G T C A G T C C G T A A C G T
C A G T A C T G A T C G T G A C G C T A A C T G T A G C G T A C C G A T A C T G T A G C G T A C G C T A T C A G

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:2
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GTGCTGGCATCCA
GGTGYTGACAGS--
 A C G T C T A G A C G T A T C G G T A C A C G T A C T G T A C G A G T C C G T A A C G T A G T C A G T C C G T A
T C A G A T C G G A C T A C T G G A C T C A G T C T A G C G T A G T A C C G T A C T A G A T C G A C G T A C G T

NRL/MA0842.1/Jaspar

Match Rank:3
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---GTGCTGGCATCCA
AATTTGCTGAC-----
 A C G T A C G T A C G T C T A G A C G T A T C G G T A C A C G T A C T G T A C G A G T C C G T A A C G T A G T C A G T C C G T A
C G T A C G T A G C A T G C A T G A C T T C A G G T A C G C A T C A T G G C T A A G T C A C G T A C G T A C G T A C G T A C G T

Mafb/MA0117.2/Jaspar

Match Rank:4
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---GTGCTGGCATCCA
AAAATGCTGACT----
 A C G T A C G T A C G T C T A G A C G T A T C G G T A C A C G T A C T G T A C G A G T C C G T A A C G T A G T C A G T C C G T A
C G T A C G T A G C T A C G T A G A C T A T C G G T A C G A C T C A T G C T G A A T G C C A G T A C G T A C G T A C G T A C G T

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.58
Offset:2
Orientation:forward strand
Alignment:GTGCTGGCATCCA-
--NCTGTCAATCAN
 C T A G A C G T A T C G G T A C A C G T A C T G T A C G A G T C C G T A A C G T A G T C A G T C C G T A A C G T
A C G T A C G T T A G C T A G C G A C T C T A G A G C T A G T C G T C A T G C A A C G T A T G C G C T A T G C A

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:6
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GTGCTGGCATCCA
-GSCTGTCACTCA
 C T A G A C G T A T C G G T A C A C G T A C T G T A C G A G T C C G T A A C G T A G T C A G T C C G T A
A C G T C T A G A T G C A T G C C G A T A C T G G A C T A T G C G C T A T G A C A G C T T A G C G C T A

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:7
Score:0.58
Offset:2
Orientation:forward strand
Alignment:GTGCTGGCATCCA-
--SCTGTCAVTCAV
 C T A G A C G T A T C G G T A C A C G T A C T G T A C G A G T C C G T A A C G T A G T C A G T C C G T A A C G T
A C G T A C G T T A C G A T G C G A C T A C T G A G C T A G T C G T C A T G C A A C G T A G T C G C T A T G C A

PB0041.1_Mafb_1/Jaspar

Match Rank:8
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----GTGCTGGCATCCA
AAATTTGCTGACTTAGA
 A C G T A C G T A C G T A C G T C T A G A C G T A T C G G T A C A C G T A C T G T A C G A G T C C G T A A C G T A G T C A G T C C G T A
G C T A C T G A C G T A G C A T C A G T G C A T C A T G G T A C G C A T C A T G C G T A A G T C C G A T G C A T C T G A C T A G G T A C

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:9
Score:0.57
Offset:1
Orientation:forward strand
Alignment:GTGCTGGCATCCA
-TGCTGACTCA--
 C T A G A C G T A T C G G T A C A C G T A C T G T A C G A G T C C G T A A C G T A G T C A G T C C G T A
A C G T G A C T C T A G G A T C C A G T A C T G C T G A A T G C G C A T A T G C C T G A A C G T A C G T

PH0014.1_Cphx/Jaspar

Match Rank:10
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GTGCTGGCATCCA-
ATGATCGAATCAAA
 C T A G A C G T A T C G G T A C A C G T A C T G T A C G A G T C C G T A A C G T A G T C A G T C C G T A A C G T
C T G A C G A T T C A G C G T A C A G T A T G C T A C G T G C A G T C A G A C T A G T C C G T A T C G A G C T A