| Rank | Motif | Name | P-value | log P-pvalue | q-value (Benjamini) | # Target Sequences with Motif | % of Targets Sequences with Motif | # Background Sequences with Motif | % of Background Sequences with Motif | Motif File |
SVG |
| 1 |
| bHLHE40(bHLH)/HepG2-BHLHE40-ChIP-Seq(GSE31477)/Homer | 1e-5 | -1.272e+01 | 0.0011 | 24.0 | 6.05% | 976.1 | 2.03% | motif file (matrix) |
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| 2 |
| USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer | 1e-5 | -1.270e+01 | 0.0011 | 29.0 | 7.30% | 1333.2 | 2.77% | motif file (matrix) |
svg |
| 3 |
| n-Myc(bHLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer | 1e-5 | -1.267e+01 | 0.0011 | 39.0 | 9.82% | 2111.4 | 4.39% | motif file (matrix) |
svg |
| 4 |
| Max(bHLH)/K562-Max-ChIP-Seq(GSE31477)/Homer | 1e-5 | -1.254e+01 | 0.0011 | 35.0 | 8.82% | 1804.0 | 3.75% | motif file (matrix) |
svg |
| 5 |
| c-Myc(bHLH)/LNCAP-cMyc-ChIP-Seq(Unpublished)/Homer | 1e-5 | -1.168e+01 | 0.0011 | 31.0 | 7.81% | 1561.3 | 3.24% | motif file (matrix) |
svg |
| 6 |
| c-Myc(bHLH)/mES-cMyc-ChIP-Seq(GSE11431)/Homer | 1e-4 | -1.066e+01 | 0.0014 | 29.0 | 7.30% | 1488.0 | 3.09% | motif file (matrix) |
svg |
| 7 |
| CLOCK(bHLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer | 1e-4 | -1.016e+01 | 0.0020 | 30.0 | 7.56% | 1611.4 | 3.35% | motif file (matrix) |
svg |
| 8 |
| NPAS(bHLH)/Liver-NPAS-ChIP-Seq(GSE39860)/Homer | 1e-3 | -7.937e+00 | 0.0163 | 58.0 | 14.61% | 4445.1 | 9.23% | motif file (matrix) |
svg |
| 9 |
| NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer | 1e-3 | -7.447e+00 | 0.0236 | 42.0 | 10.58% | 2984.3 | 6.20% | motif file (matrix) |
svg |
| 10 |
| HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer | 1e-2 | -6.642e+00 | 0.0475 | 16.0 | 4.03% | 806.6 | 1.68% | motif file (matrix) |
svg |
| 11 |
| BMAL1(bHLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer | 1e-2 | -6.583e+00 | 0.0475 | 61.0 | 15.37% | 5009.4 | 10.41% | motif file (matrix) |
svg |
| 12 |
| Usf2(bHLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer | 1e-2 | -5.654e+00 | 0.1063 | 14.0 | 3.53% | 731.1 | 1.52% | motif file (matrix) |
svg |
| 13 |
| GATA(Zf),IR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer | 1e-2 | -4.817e+00 | 0.2264 | 4.0 | 1.01% | 94.8 | 0.20% | motif file (matrix) |
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