Information for 5-CCCTCGCCCGGGG (Motif 9)

A G T C A G T C G T A C A C G T A G T C A C T G A G T C G T A C A G T C A C T G C T A G A C T G A C T G
Reverse Opposite:
A G T C A G T C A G T C G T A C A C T G A C T G A C T G T G A C A C T G C G T A A C T G A C T G A C T G
p-value:1e-11
log p-value:-2.609e+01
Information Content per bp:1.897
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.64%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets33.7 +/- 27.0bp
Average Position of motif in Background59.5 +/- 10.9bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0103.1_Zic3_1/Jaspar

Match Rank:1
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:CCCTCGCCCGGGG---
-NCCCCCCCGGGGGGN
 A G T C A G T C G T A C A C G T A G T C A C T G A G T C G T A C A G T C A C T G C T A G A C T G A C T G A C G T A C G T A C G T
A C G T T C G A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G T A C G A C T G C A T G C A T G C A T G T A C G

PB0102.1_Zic2_1/Jaspar

Match Rank:2
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:CCCTCGCCCGGGG---
-ACCCCCCCGGGGGGN
 A G T C A G T C G T A C A C G T A G T C A C T G A G T C G T A C A G T C A C T G C T A G A C T G A C T G A C G T A C G T A C G T
A C G T T G C A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G A T C G A C T G C A T G C A T G C A T G T A C G

PB0101.1_Zic1_1/Jaspar

Match Rank:3
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:CCCTCGCCCGGGG--
-CCCCCCCGGGGGNN
 A G T C A G T C G T A C A C G T A G T C A C T G A G T C G T A C A G T C A C T G C T A G A C T G A C T G A C G T A C G T
A C G T T A G C T G A C G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G C A G T T A C G

PB0087.1_Tcfap2c_1/Jaspar

Match Rank:4
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:CCCTCGCCCGGGG----
--NTCGCCTCAGGCAAT
 A G T C A G T C G T A C A C G T A G T C A C T G A G T C G T A C A G T C A C T G C T A G A C T G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T G C A T C G A T G A T C A T C G G T A C A G T C A G C T T A G C T C G A C T A G A C T G T A G C C T G A C G T A C G A T

PB0085.1_Tcfap2a_1/Jaspar

Match Rank:5
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:CCCTCGCCCGGGG----
--NTCCCCTCAGGGANT
 A G T C A G T C G T A C A C G T A G T C A C T G A G T C G T A C A G T C A C T G C T A G A C T G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T G A C T C G A T G A T C A T G C G T A C A G T C A G C T T A G C T C G A C T A G A C T G T A C G C G T A G C T A G C A T

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:6
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:CCCTCGCCCGGGG----
--NTNGCCTCAGGCNNN
 A G T C A G T C G T A C A C G T A G T C A C T G A G T C G T A C A G T C A C T G C T A G A C T G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T G C T A C A G T G A C T A T C G A G T C A G T C A G C T T A G C T C G A T C A G A C T G T A G C C G T A C G T A C G A T

Zfp281(Zf)/ES-Zfp281-ChIP-Seq(GSE81042)/Homer

Match Rank:7
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CCCTCGCCCGGGG
CCCCTCCCCCAC--
 A C G T A G T C A G T C G T A C A C G T A G T C A C T G A G T C G T A C A G T C A C T G C T A G A C T G A C T G
T A G C G T A C A G T C G T A C C G A T A G T C A G T C A G T C A G T C A G T C C G T A G A T C A C G T A C G T

SP1/MA0079.3/Jaspar

Match Rank:8
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CCCTCGCCCGGGG
GCCCCGCCCCC----
 A C G T A C G T A G T C A G T C G T A C A C G T A G T C A C T G A G T C G T A C A G T C A C T G C T A G A C T G A C T G
A C T G A G T C G A T C A G T C A G T C C A T G A G T C A G T C A G T C G A T C A G T C A C G T A C G T A C G T A C G T

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.58
Offset:2
Orientation:forward strand
Alignment:CCCTCGCCCGGGG-
--GTCCCCAGGGGA
 A G T C A G T C G T A C A C G T A G T C A C T G A G T C G T A C A G T C A C T G C T A G A C T G A C T G A C G T
A C G T A C G T C A T G A C G T A G T C G A T C G A T C G A T C G C T A C T A G C T A G C T A G T C A G T C G A

ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--CCCTCGCCCGGGG
KGCCCTTCCCCA---
 A C G T A C G T A G T C A G T C G T A C A C G T A G T C A C T G A G T C G T A C A G T C A C T G C T A G A C T G A C T G
C A G T C A T G G A T C G A T C G A T C G A C T A G C T T G A C G A T C G A T C G A T C C T G A A C G T A C G T A C G T