Information for 11-CTGCGRACCGCSG (Motif 17)

A G T C A C G T A C T G G T A C A C T G T C G A C T G A A T G C A G T C A C T G A G T C T A G C A T C G
Reverse Opposite:
A T G C A T C G A C T G A G T C A C T G A T C G A G C T A G C T G T A C A C T G A G T C C G T A A C T G
p-value:1e-8
log p-value:-2.001e+01
Information Content per bp:1.852
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.18%
Number of Background Sequences with motif44.9
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets47.9 +/- 26.1bp
Average Position of motif in Background48.8 +/- 31.2bp
Strand Bias (log2 ratio + to - strand density)-0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NRL/MA0842.1/Jaspar

Match Rank:1
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---CTGCGRACCGCSG
AATTTGCTGAC-----
 A C G T A C G T A C G T A G T C A C G T A C T G G T A C A C T G T C G A C T G A A T G C A G T C A C T G A G T C T A G C A T C G
C G T A C G T A G C A T G C A T G A C T T C A G G T A C G C A T C A T G G C T A A G T C A C G T A C G T A C G T A C G T A C G T

RUNX2/MA0511.2/Jaspar

Match Rank:2
Score:0.52
Offset:4
Orientation:forward strand
Alignment:CTGCGRACCGCSG
----AAACCGCAA
 A G T C A C G T A C T G G T A C A C T G T C G A C T G A A T G C A G T C A C T G A G T C T A G C A T C G
A C G T A C G T A C G T A C G T G C T A C T G A G T C A A G T C A G T C C T A G A G T C T G C A T C G A

POL009.1_DCE_S_II/Jaspar

Match Rank:3
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-CTGCGRACCGCSG
GCTGTG--------
 A C G T A G T C A C G T A C T G G T A C A C T G T C G A C T G A A T G C A G T C A C T G A G T C T A G C A T C G
T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0199.1_Zfp161_2/Jaspar

Match Rank:4
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:CTGCGRACCGCSG-
NNGCNCTGCGCGGC
 A G T C A C G T A C T G G T A C A C T G T C G A C T G A A T G C A G T C A C T G A G T C T A G C A T C G A C G T
T C G A A G T C C A T G G A T C T G C A G A T C C A G T A C T G A G T C C T A G A T G C C T A G C T A G G T A C

PB0164.1_Smad3_2/Jaspar

Match Rank:5
Score:0.50
Offset:1
Orientation:forward strand
Alignment:CTGCGRACCGCSG-----
-TACGCCCCGCCACTCTG
 A G T C A C G T A C T G G T A C A C T G T C G A C T G A A T G C A G T C A C T G A G T C T A G C A T C G A C G T A C G T A C G T A C G T A C G T
A C G T C A G T G T C A G T A C A C T G G A T C A G T C T A G C A T G C T A C G A G T C G T A C G T C A G T A C G A C T A G T C G A C T A C T G

Hic1/MA0739.1/Jaspar

Match Rank:6
Score:0.49
Offset:0
Orientation:forward strand
Alignment:CTGCGRACCGCSG
ATGCCAACC----
 A G T C A C G T A C T G G T A C A C T G T C G A C T G A A T G C A G T C A C T G A G T C T A G C A T C G
T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C A C G T A C G T A C G T A C G T

GATA:SCL(Zf,bHLH)/Ter119-SCL-ChIP-Seq(GSE18720)/Homer

Match Rank:7
Score:0.48
Offset:-3
Orientation:forward strand
Alignment:---CTGCGRACCGCSG----
CNGCTGNNGNNNNCAGATAA
 A C G T A C G T A C G T A G T C A C G T A C T G G T A C A C T G T C G A C T G A A T G C A G T C A C T G A G T C T A G C A T C G A C G T A C G T A C G T A C G T
T G A C C T A G A C T G T A G C C G A T A C T G A T G C C A T G A T C G A T C G A T C G T A G C C T G A T A G C G C T A A C T G C G T A A G C T C G T A C T G A

RUNX3/MA0684.1/Jaspar

Match Rank:8
Score:0.48
Offset:4
Orientation:forward strand
Alignment:CTGCGRACCGCSG-
----AAACCGCAAA
 A G T C A C G T A C T G G T A C A C T G T C G A C T G A A T G C A G T C A C T G A G T C T A G C A T C G A C G T
A C G T A C G T A C G T A C G T G C T A T C G A T G C A G T A C A T G C T C A G A T G C T G C A T C G A G C T A

MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer

Match Rank:9
Score:0.48
Offset:4
Orientation:reverse strand
Alignment:CTGCGRACCGCSG
----YAACBGCC-
 A G T C A C G T A C T G G T A C A C T G T C G A C T G A A T G C A G T C A C T G A G T C T A G C A T C G
A C G T A C G T A C G T A C G T A G C T C G T A C G T A A G T C A G T C A C T G G A T C G A T C A C G T

PB0029.1_Hic1_1/Jaspar

Match Rank:10
Score:0.48
Offset:-3
Orientation:forward strand
Alignment:---CTGCGRACCGCSG
ACTATGCCAACCTACC
 A C G T A C G T A C G T A G T C A C G T A C T G G T A C A C T G T C G A C T G A A T G C A G T C A C T G A G T C T A G C A T C G
C G T A A G T C A C G T C T G A A C G T C T A G A T G C A G T C G T C A T G C A A G T C A G T C G C A T C T G A G A T C G A T C