Information for 9-GCCACCTGCCAGA (Motif 15)

A C T G G T A C A G T C C G T A A G T C A G T C A G C T A C T G A G T C A G T C C G T A A C T G C G T A
Reverse Opposite:
A C G T A G T C A C G T A C T G A C T G A G T C C T G A C T A G A C T G C G A T A C T G A C T G A G T C
p-value:1e-9
log p-value:-2.105e+01
Information Content per bp:1.913
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.54%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets65.4 +/- 23.0bp
Average Position of motif in Background42.1 +/- 27.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:1
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-GCCACCTGCCAGA
SNGCACCTGCHS--
 A C G T A C T G G T A C A G T C C G T A A G T C A G T C A G C T A C T G A G T C A G T C C G T A A C T G C G T A
T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C A C G T A C G T

HES5/MA0821.1/Jaspar

Match Rank:2
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-GCCACCTGCCAGA
CGGCACGTGCCA--
 A C G T A C T G G T A C A G T C C G T A A G T C A G T C A G C T A C T G A G T C A G T C C G T A A C T G C G T A
G A T C T C A G T C A G A G T C C T G A G A T C C T A G A G C T A C T G A G T C A G T C C T G A A C G T A C G T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:3
Score:0.67
Offset:5
Orientation:reverse strand
Alignment:GCCACCTGCCAGA--
-----ATGCCAGACN
 A C T G G T A C A G T C C G T A A G T C A G T C A G C T A C T G A G T C A G T C C G T A A C T G C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C

HES7/MA0822.1/Jaspar

Match Rank:4
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-GCCACCTGCCAGA
TGGCACGTGCCA--
 A C G T A C T G G T A C A G T C C G T A A G T C A G T C A G C T A C T G A G T C A G T C C G T A A C T G C G T A
G A C T T C A G T C A G G A T C T C G A A G T C C T A G G A C T T C A G G A T C A G T C C T G A A C G T A C G T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:5
Score:0.66
Offset:0
Orientation:forward strand
Alignment:GCCACCTGCCAGA
NNCACCTGNN---
 A C T G G T A C A G T C C G T A A G T C A G T C A G C T A C T G A G T C A G T C C G T A A C T G C G T A
A T G C T G C A A G T C C G T A A G T C A G T C A C G T A C T G A T G C G T C A A C G T A C G T A C G T

PKNOX2/MA0783.1/Jaspar

Match Rank:6
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-GCCACCTGCCAGA
TGACACCTGTCA--
 A C G T A C T G G T A C A G T C C G T A A G T C A G T C A G C T A C T G A G T C A G T C C G T A A C T G C G T A
G A C T A C T G C T G A A G T C C T G A A T G C G T A C G C A T C T A G G A C T A T G C G C T A A C G T A C G T

SNAI2/MA0745.1/Jaspar

Match Rank:7
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:GCCACCTGCCAGA
-NCACCTGTN---
 A C T G G T A C A G T C C G T A A G T C A G T C A G C T A C T G A G T C A G T C C G T A A C T G C G T A
A C G T T C G A G T A C C T G A G A T C G A T C C G A T C A T G G A C T G A C T A C G T A C G T A C G T

PKNOX1/MA0782.1/Jaspar

Match Rank:8
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GCCACCTGCCAGA
TGACACCTGTCA--
 A C G T A C T G G T A C A G T C C G T A A G T C A G T C A G C T A C T G A G T C A G T C C G T A A C T G C G T A
G C A T A T C G C G T A A G T C T C G A A T G C G T A C G A C T C A T G G A C T A T G C C T G A A C G T A C G T

HEY2/MA0649.1/Jaspar

Match Rank:9
Score:0.63
Offset:0
Orientation:forward strand
Alignment:GCCACCTGCCAGA
GACACGTGCC---
 A C T G G T A C A G T C C G T A A G T C A G T C A G C T A C T G A G T C A G T C C G T A A C T G C G T A
C T A G T C G A T G A C C T G A G T A C T A C G G A C T A T C G A G T C T A G C A C G T A C G T A C G T

ID4/MA0824.1/Jaspar

Match Rank:10
Score:0.63
Offset:0
Orientation:forward strand
Alignment:GCCACCTGCCAGA
TACACCTGTC---
 A C T G G T A C A G T C C G T A A G T C A G T C A G C T A C T G A G T C A G T C C G T A A C T G C G T A
C A G T T C G A A G T C C T G A A T G C T A G C C G A T T C A G A G C T G A T C A C G T A C G T A C G T