p-value: | 1e-18 |
log p-value: | -4.324e+01 |
Information Content per bp: | 1.798 |
Number of Target Sequences with motif | 8.0 |
Percentage of Target Sequences with motif | 0.99% |
Number of Background Sequences with motif | 1.5 |
Percentage of Background Sequences with motif | 0.00% |
Average Position of motif in Targets | 54.2 +/- 24.0bp |
Average Position of motif in Background | 93.0 +/- 0.0bp |
Strand Bias (log2 ratio + to - strand density) | 2.0 |
Multiplicity (# of sites on avg that occur together) | 1.25 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
REST/MA0138.2/Jaspar
Match Rank: | 1 |
Score: | 0.87 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -TCASCACCATGGACAG---- TTCAGCACCATGGACAGCGCC |
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REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer
Match Rank: | 2 |
Score: | 0.87 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | TCASCACCATGGACAG---- TCAGCACCATGGACAGCTCC |
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AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer
Match Rank: | 3 |
Score: | 0.58 |
Offset: | 6 |
Orientation: | forward strand |
Alignment: | TCASCACCATGGACAG ------CCAGGAACAG |
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SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer
Match Rank: | 4 |
Score: | 0.55 |
Offset: | 7 |
Orientation: | forward strand |
Alignment: | TCASCACCATGGACAG- -------CAAGGHCANV |
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PB0196.1_Zbtb7b_2/Jaspar
Match Rank: | 5 |
Score: | 0.55 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----TCASCACCATGGACAG CATAAGACCACCATTAC--- |
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Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer
Match Rank: | 6 |
Score: | 0.52 |
Offset: | 5 |
Orientation: | forward strand |
Alignment: | TCASCACCATGGACAG -----BTCAAGGTCA- |
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Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer
Match Rank: | 7 |
Score: | 0.52 |
Offset: | 6 |
Orientation: | forward strand |
Alignment: | TCASCACCATGGACAG ------CAAAGGTCAG |
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Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer
Match Rank: | 8 |
Score: | 0.52 |
Offset: | 5 |
Orientation: | forward strand |
Alignment: | TCASCACCATGGACAG -----NTCAAGGTCA- |
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RORA/MA0071.1/Jaspar
Match Rank: | 9 |
Score: | 0.50 |
Offset: | 5 |
Orientation: | forward strand |
Alignment: | TCASCACCATGGACAG -----ATCAAGGTCA- |
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RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer
Match Rank: | 10 |
Score: | 0.50 |
Offset: | 5 |
Orientation: | forward strand |
Alignment: | TCASCACCATGGACAG -----AAYTAGGTCA- |
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