Information for 2-CAATGACTGAGGC (Motif 3)

A G T C C G T A C G T A A C G T A C T G C T G A T A G C A C G T A C T G C G T A A C T G C A T G G T A C
Reverse Opposite:
A C T G G T A C A G T C C G A T A G T C T G C A A C T G A G C T A G T C C G T A A C G T A C G T C T A G
p-value:1e-13
log p-value:-3.028e+01
Information Content per bp:1.806
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.17%
Number of Background Sequences with motif12.8
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets34.9 +/- 23.3bp
Average Position of motif in Background46.4 +/- 16.0bp
Strand Bias (log2 ratio + to - strand density)-1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0028.1_Hbp1_1/Jaspar

Match Rank:1
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----CAATGACTGAGGC
ACTATGAATGAATGAT--
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A C G T A A C G T A C T G C T G A T A G C A C G T A C T G C G T A A C T G C A T G G T A C
G C T A G T A C C G A T G C T A G C A T T A C G C G T A C G T A C G A T A C T G C T G A T C G A G A C T C A T G C T G A A G C T A C G T A C G T

MAFG::NFE2L1/MA0089.1/Jaspar

Match Rank:2
Score:0.64
Offset:1
Orientation:forward strand
Alignment:CAATGACTGAGGC
-CATGAC------
 A G T C C G T A C G T A A C G T A C T G C T G A T A G C A C G T A C T G C G T A A C T G C A T G G T A C
A C G T T A G C T C G A A C G T C A T G C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T

Sox17/MA0078.1/Jaspar

Match Rank:3
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--CAATGACTGAGGC
GACAATGNN------
 A C G T A C G T A G T C C G T A C G T A A C G T A C T G C T G A T A G C A C G T A C T G C G T A A C T G C A T G G T A C
T A C G G T C A A G T C C G T A C T G A C G A T C T A G C G T A C T A G A C G T A C G T A C G T A C G T A C G T A C G T

BATF::JUN/MA0462.1/Jaspar

Match Rank:4
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CAATGACTGAGGC
GAAATGACTCA---
 A C G T A G T C C G T A C G T A A C G T A C T G C T G A T A G C A C G T A C T G C G T A A C T G C A T G G T A C
C T A G C T G A C G T A G T C A A C G T A C T G C G T A T A G C A C G T T G A C C G T A A C G T A C G T A C G T

MSX1/MA0666.1/Jaspar

Match Rank:5
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CAATGACTGAGGC
CCAATTAG------
 A C G T A G T C C G T A C G T A A C G T A C T G C T G A T A G C A C G T A C T G C G T A A C T G C A T G G T A C
A T G C G A T C T G C A G T C A A C G T A C G T T G C A T C A G A C G T A C G T A C G T A C G T A C G T A C G T

PB0183.1_Sry_2/Jaspar

Match Rank:6
Score:0.58
Offset:-8
Orientation:forward strand
Alignment:--------CAATGACTGAGGC
TCACGGAACAATAGGTG----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A C G T A A C G T A C T G C T G A T A G C A C G T A C T G C G T A A C T G C A T G G T A C
G A C T G A T C C G T A G T A C C A T G T C A G T G C A C G T A A G T C C T G A C G T A G C A T C T G A C T A G T C A G G A C T T A C G A C G T A C G T A C G T A C G T

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:7
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----CAATGACTGAGGC
VRAACAATGG-------
 A C G T A C G T A C G T A C G T A G T C C G T A C G T A A C G T A C T G C T G A T A G C A C G T A C T G C G T A A C T G C A T G G T A C
T G A C C T G A T C G A C G T A T A G C G T C A T C G A G C A T C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

FOS/MA0476.1/Jaspar

Match Rank:8
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CAATGACTGAGGC
-NATGAGTCANN-
 A G T C C G T A C G T A A C G T A C T G C T G A T A G C A C G T A C T G C G T A A C T G C A T G G T A C
A C G T T C G A T C G A A C G T A C T G C G T A T A C G A C G T G T A C C G T A A T G C G T C A A C G T

JDP2/MA0655.1/Jaspar

Match Rank:9
Score:0.58
Offset:2
Orientation:forward strand
Alignment:CAATGACTGAGGC
--ATGACTCAT--
 A G T C C G T A C G T A A C G T A C T G C T G A T A G C A C G T A C T G C G T A A C T G C A T G G T A C
A C G T A C G T T C G A G A C T A C T G C G T A T A G C C A G T G T A C C G T A G A C T A C G T A C G T

EN2/MA0642.1/Jaspar

Match Rank:10
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CAATGACTGAGGC
CCCAATTAGC-----
 A C G T A C G T A G T C C G T A C G T A A C G T A C T G C T G A T A G C A C G T A C T G C G T A A C T G C A T G G T A C
T A G C A T G C A G T C T G C A T G C A A C G T A G C T C T G A T A C G A T G C A C G T A C G T A C G T A C G T A C G T