Information for 8-AAGGAGGCAGAGA (Motif 13)

C G T A C G T A A C T G A C T G C G T A C T A G A C T G A T G C C G T A A C T G C G T A A T C G C G T A
Reverse Opposite:
A C G T A T G C A C G T A G T C A C G T A T C G A G T C A G T C A C G T A G T C A G T C A C G T A C G T
p-value:1e-10
log p-value:-2.394e+01
Information Content per bp:1.934
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.82%
Number of Background Sequences with motif6.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets44.9 +/- 26.8bp
Average Position of motif in Background40.1 +/- 24.9bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:1
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:AAGGAGGCAGAGA-
-AGGTGNCAGACAG
 C G T A C G T A A C T G A C T G C G T A C T A G A C T G A T G C C G T A A C T G C G T A A T C G C G T A A C G T
A C G T C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.60
Offset:1
Orientation:forward strand
Alignment:AAGGAGGCAGAGA
-AGGTGHCAGACA
 C G T A C G T A A C T G A C T G C G T A C T A G A C T G A T G C C G T A A C T G C G T A A T C G C G T A
A C G T C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A

ZNF263/MA0528.1/Jaspar

Match Rank:3
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-AAGGAGGCAGAGA-------
GGAGGAGGAGGGGGAGGAGGA
 A C G T C G T A C G T A A C T G A C T G C G T A C T A G A C T G A T G C C G T A A C T G C G T A A T C G C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T A G C T A G C T G A C A T G T A C G G C T A C A T G T C A G T C G A T C A G C T A G C T A G C T A G T C A G C T G A C T A G C T A G C T G A C T A G C T A G C T G A

ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer

Match Rank:4
Score:0.55
Offset:1
Orientation:forward strand
Alignment:AAGGAGGCAGAGA
-AGGAAACAGCTG
 C G T A C G T A A C T G A C T G C G T A C T A G A C T G A T G C C G T A A C T G C G T A A T C G C G T A
A C G T T C G A A C T G A C T G C G T A C G T A T C G A A G T C C T G A A T C G G T A C G C A T C A T G

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.55
Offset:3
Orientation:forward strand
Alignment:AAGGAGGCAGAGA
---GAGSCCGAGC
 C G T A C G T A A C T G A C T G C G T A C T A G A C T G A T G C C G T A A C T G C G T A A T C G C G T A
A C G T A C G T A C G T A C T G C G T A A C T G A T G C T G A C G A T C A T C G T G C A A C T G A G T C

E2F6/MA0471.1/Jaspar

Match Rank:6
Score:0.55
Offset:1
Orientation:forward strand
Alignment:AAGGAGGCAGAGA
-GGGCGGGAAGG-
 C G T A C G T A A C T G A C T G C G T A C T A G A C T G A T G C C G T A A C T G C G T A A T C G C G T A
A C G T C T A G T C A G A C T G G T A C C T A G A C T G T A C G C G T A C T G A T C A G T C A G A C G T

EWSR1-FLI1/MA0149.1/Jaspar

Match Rank:7
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--AAGGAGGCAGAGA---
GGAAGGAAGGAAGGAAGG
 A C G T A C G T C G T A C G T A A C T G A C T G C G T A C T A G A C T G A T G C C G T A A C T G C G T A A T C G C G T A A C G T A C G T A C G T
A C T G C T A G C T G A C T G A C T A G C T A G C T G A C T G A A C T G A T C G T G C A C G T A A C T G A T C G G T C A C T G A C T A G T A C G

SpiB(ETS)/OCILY3-SPIB-ChIP-Seq(GSE56857)/Homer

Match Rank:8
Score:0.53
Offset:0
Orientation:forward strand
Alignment:AAGGAGGCAGAGA
AAAGRGGAAGTG-
 C G T A C G T A A C T G A C T G C G T A C T A G A C T G A T G C C G T A A C T G C G T A A T C G C G T A
C G T A C T G A C G T A C T A G T C G A C T A G A C T G C G T A C G T A T A C G A G C T A T C G A C G T

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:9
Score:0.52
Offset:1
Orientation:forward strand
Alignment:AAGGAGGCAGAGA
-RGKGGGCGGAGC
 C G T A C G T A A C T G A C T G C G T A C T A G A C T G A T G C C G T A A C T G C G T A A T C G C G T A
A C G T C T G A T C A G C A G T C T A G A C T G C T A G G A T C A T C G A C T G C T G A T C A G G A T C

SPIC/MA0687.1/Jaspar

Match Rank:10
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--AAGGAGGCAGAGA
AAAAAGAGGAAGTA-
 A C G T A C G T C G T A C G T A A C T G A C T G C G T A C T A G A C T G A T G C C G T A A C T G C G T A A T C G C G T A
G T C A C T G A G T C A G T C A C G T A T A C G T G C A A T C G C A T G G C T A T G C A C T A G G C A T G T C A A C G T