Information for 6-TTASCWYWGAAAC (Motif 11)

A C G T A C G T C G T A A T C G A G T C C G A T A G C T C G T A A C T G C T G A C G T A C G T A G A T C
Reverse Opposite:
C T A G A C G T A C G T A G C T A G T C C G A T C T G A C G T A A C T G A T G C A C G T C G T A C G T A
p-value:1e-11
log p-value:-2.577e+01
Information Content per bp:1.856
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.05%
Number of Background Sequences with motif13.8
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets47.4 +/- 28.4bp
Average Position of motif in Background51.1 +/- 26.9bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:1
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:TTASCWYWGAAAC-
TTGCCATGGCAACC
 A C G T A C G T C G T A A T C G A G T C C G A T A G C T C G T A A C T G C T G A C G T A C G T A G A T C A C G T
A G C T G A C T C A T G A G T C G A T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A G A T C G T A C

RFX5/MA0510.2/Jaspar

Match Rank:2
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--TTASCWYWGAAAC-
NGTTGCCATGGCAACG
 A C G T A C G T A C G T A C G T C G T A A T C G A G T C C G A T A G C T C G T A A C T G C T G A C G T A C G T A G A T C A C G T
A T G C C T A G A C G T G A C T C T A G A G T C A G T C C G T A G C A T T C A G T C A G G A T C C T G A T C G A G A T C T A C G

Rfx1/MA0509.1/Jaspar

Match Rank:3
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-TTASCWYWGAAAC
GTTGCCATGGCAAC
 A C G T A C G T A C G T C G T A A T C G A G T C C G A T A G C T C G T A A C T G C T G A C G T A C G T A G A T C
C T A G A C G T G A C T A C T G A G T C A G T C G C T A G C A T C T A G C T A G G T A C C T G A C T G A A G T C

RFX3/MA0798.1/Jaspar

Match Rank:4
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--TTASCWYWGAAAC-
CGTTGCCATGGCAACG
 A C G T A C G T A C G T A C G T C G T A A T C G A G T C C G A T A G C T C G T A A C T G C T G A C G T A C G T A G A T C A C G T
A T G C C T A G G A C T G C A T C T A G A G T C A G T C C G T A G C A T T C A G T C A G G A T C C G T A T C G A G A T C T A C G

RFX2/MA0600.2/Jaspar

Match Rank:5
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--TTASCWYWGAAAC-
CGTTGCCATGGCAACG
 A C G T A C G T A C G T A C G T C G T A A T C G A G T C C G A T A G C T C G T A A C T G C T G A C G T A C G T A G A T C A C G T
A T G C C T A G G A C T G C A T C T A G A G T C A G T C C G T A G C A T T C A G T C A G G A T C C G T A C T G A A G T C T A C G

Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:6
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:TTASCWYWGAAAC-
TTGCCATGGCAACN
 A C G T A C G T C G T A A T C G A G T C C G A T A G C T C G T A A C T G C T G A C G T A C G T A G A T C A C G T
A G C T G A C T C A T G A G T C A G T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A A G T C T G A C

PB0055.1_Rfx4_1/Jaspar

Match Rank:7
Score:0.64
Offset:1
Orientation:forward strand
Alignment:TTASCWYWGAAAC---
-TACCATAGCAACGGT
 A C G T A C G T C G T A A T C G A G T C C G A T A G C T C G T A A C T G C T G A C G T A C G T A G A T C A C G T A C G T A C G T
A C G T A G C T G T C A T A G C A T G C G T C A A G C T T C G A C T A G G A T C C T G A C T G A A G T C T A C G T C A G C G A T

RFX4/MA0799.1/Jaspar

Match Rank:8
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--TTASCWYWGAAAC-
CGTTGCCATGGCAACN
 A C G T A C G T A C G T A C G T C G T A A T C G A G T C C G A T A G C T C G T A A C T G C T G A C G T A C G T A G A T C A C G T
A T G C C T A G A G C T G C A T C T A G A G T C A G T C C G T A G C A T T C A G T C A G G A T C C G T A C G T A G A T C T A C G

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.63
Offset:3
Orientation:forward strand
Alignment:TTASCWYWGAAAC--
---SCCTAGCAACAG
 A C G T A C G T C G T A A T C G A G T C C G A T A G C T C G T A A C T G C T G A C G T A C G T A G A T C A C G T A C G T
A C G T A C G T A C G T A T G C A G T C G T A C A G C T T C G A C T A G G A T C C T G A G T C A A G T C G C T A T C A G

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.62
Offset:5
Orientation:forward strand
Alignment:TTASCWYWGAAAC--
-----ACTGAAACCA
 A C G T A C G T C G T A A T C G A G T C C G A T A G C T C G T A A C T G C T G A C G T A C G T A G A T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C T A T A G C A G C T A T C G G T C A C G T A G C T A A T G C G A T C C T G A