Rank | Motif | Name | P-value | log P-pvalue | q-value (Benjamini) | # Target Sequences with Motif | % of Targets Sequences with Motif | # Background Sequences with Motif | % of Background Sequences with Motif | Motif File |
SVG |
1 |
| FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer | 1e-18 | -4.162e+01 | 0.0000 | 66.0 | 7.00% | 909.5 | 1.91% | motif file (matrix) |
svg |
2 |
| FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer | 1e-16 | -3.734e+01 | 0.0000 | 73.0 | 7.74% | 1183.6 | 2.49% | motif file (matrix) |
svg |
3 |
| Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer | 1e-15 | -3.578e+01 | 0.0000 | 58.0 | 6.15% | 816.2 | 1.72% | motif file (matrix) |
svg |
4 |
| Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer | 1e-14 | -3.424e+01 | 0.0000 | 33.0 | 3.50% | 280.8 | 0.59% | motif file (matrix) |
svg |
5 |
| FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer | 1e-13 | -3.176e+01 | 0.0000 | 62.0 | 6.57% | 1007.0 | 2.12% | motif file (matrix) |
svg |
6 |
| Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer | 1e-11 | -2.663e+01 | 0.0000 | 63.0 | 6.68% | 1167.7 | 2.46% | motif file (matrix) |
svg |
7 |
| Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer | 1e-10 | -2.502e+01 | 0.0000 | 50.0 | 5.30% | 832.1 | 1.75% | motif file (matrix) |
svg |
8 |
| FOXK1(Forkhead)/HEK293-FOXK1-ChIP-Seq(GSE51673)/Homer | 1e-9 | -2.218e+01 | 0.0000 | 56.0 | 5.94% | 1085.5 | 2.28% | motif file (matrix) |
svg |
9 |
| FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer | 1e-8 | -1.928e+01 | 0.0000 | 43.0 | 4.56% | 778.1 | 1.64% | motif file (matrix) |
svg |
10 |
| Foxo3(Forkhead)/U2OS-Foxo3-ChIP-Seq(E-MTAB-2701)/Homer | 1e-7 | -1.783e+01 | 0.0000 | 41.0 | 4.35% | 759.5 | 1.60% | motif file (matrix) |
svg |
11 |
| NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer | 1e-6 | -1.450e+01 | 0.0000 | 42.0 | 4.45% | 896.0 | 1.88% | motif file (matrix) |
svg |
12 |
| Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer | 1e-5 | -1.206e+01 | 0.0002 | 81.0 | 8.59% | 2433.2 | 5.12% | motif file (matrix) |
svg |
13 |
| Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer | 1e-5 | -1.202e+01 | 0.0002 | 49.0 | 5.20% | 1234.4 | 2.60% | motif file (matrix) |
svg |
14 |
| Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer | 1e-5 | -1.195e+01 | 0.0002 | 95.0 | 10.07% | 2998.3 | 6.31% | motif file (matrix) |
svg |
15 |
| IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer | 1e-5 | -1.183e+01 | 0.0002 | 29.0 | 3.08% | 573.3 | 1.21% | motif file (matrix) |
svg |
16 |
| FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer | 1e-5 | -1.177e+01 | 0.0002 | 33.0 | 3.50% | 701.6 | 1.48% | motif file (matrix) |
svg |
17 |
| Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer | 1e-5 | -1.156e+01 | 0.0002 | 19.0 | 2.01% | 292.0 | 0.61% | motif file (matrix) |
svg |
18 |
| Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer | 1e-4 | -1.036e+01 | 0.0006 | 75.0 | 7.95% | 2316.4 | 4.87% | motif file (matrix) |
svg |
19 |
| Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer | 1e-4 | -1.024e+01 | 0.0007 | 44.0 | 4.67% | 1142.7 | 2.40% | motif file (matrix) |
svg |
20 |
| HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer | 1e-4 | -9.790e+00 | 0.0010 | 40.0 | 4.24% | 1021.4 | 2.15% | motif file (matrix) |
svg |
21 |
| YY1(Zf)/Promoter/Homer | 1e-3 | -8.918e+00 | 0.0023 | 15.0 | 1.59% | 241.3 | 0.51% | motif file (matrix) |
svg |
22 |
| HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer | 1e-3 | -8.675e+00 | 0.0028 | 24.0 | 2.55% | 520.8 | 1.10% | motif file (matrix) |
svg |
23 |
| Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer | 1e-3 | -7.907e+00 | 0.0058 | 33.0 | 3.50% | 863.4 | 1.82% | motif file (matrix) |
svg |
24 |
| Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer | 1e-3 | -7.838e+00 | 0.0060 | 45.0 | 4.77% | 1315.9 | 2.77% | motif file (matrix) |
svg |
25 |
| Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer | 1e-3 | -7.809e+00 | 0.0060 | 142.0 | 15.06% | 5422.2 | 11.41% | motif file (matrix) |
svg |
26 |
| FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer | 1e-3 | -7.391e+00 | 0.0086 | 20.0 | 2.12% | 436.0 | 0.92% | motif file (matrix) |
svg |
27 |
| Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer | 1e-3 | -7.233e+00 | 0.0097 | 104.0 | 11.03% | 3816.8 | 8.03% | motif file (matrix) |
svg |
28 |
| Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer | 1e-3 | -7.216e+00 | 0.0097 | 22.0 | 2.33% | 509.5 | 1.07% | motif file (matrix) |
svg |
29 |
| Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer | 1e-3 | -7.200e+00 | 0.0097 | 87.0 | 9.23% | 3086.1 | 6.49% | motif file (matrix) |
svg |
30 |
| Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer | 1e-3 | -7.180e+00 | 0.0097 | 40.0 | 4.24% | 1165.5 | 2.45% | motif file (matrix) |
svg |
31 |
| Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer | 1e-3 | -7.068e+00 | 0.0100 | 19.0 | 2.01% | 415.1 | 0.87% | motif file (matrix) |
svg |
32 |
| Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer | 1e-2 | -6.859e+00 | 0.0119 | 31.0 | 3.29% | 845.1 | 1.78% | motif file (matrix) |
svg |
33 |
| Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer | 1e-2 | -6.565e+00 | 0.0155 | 62.0 | 6.57% | 2094.7 | 4.41% | motif file (matrix) |
svg |
34 |
| E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer | 1e-2 | -6.340e+00 | 0.0189 | 123.0 | 13.04% | 4770.3 | 10.04% | motif file (matrix) |
svg |
35 |
| Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer | 1e-2 | -6.190e+00 | 0.0213 | 123.0 | 13.04% | 4791.5 | 10.08% | motif file (matrix) |
svg |
36 |
| Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer | 1e-2 | -6.074e+00 | 0.0233 | 87.0 | 9.23% | 3211.8 | 6.76% | motif file (matrix) |
svg |
37 |
| E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer | 1e-2 | -6.008e+00 | 0.0242 | 106.0 | 11.24% | 4056.8 | 8.53% | motif file (matrix) |
svg |
38 |
| Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer | 1e-2 | -5.588e+00 | 0.0358 | 97.0 | 10.29% | 3712.8 | 7.81% | motif file (matrix) |
svg |
39 |
| E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer | 1e-2 | -5.494e+00 | 0.0384 | 84.0 | 8.91% | 3150.1 | 6.63% | motif file (matrix) |
svg |
40 |
| BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer | 1e-2 | -5.448e+00 | 0.0392 | 78.0 | 8.27% | 2893.2 | 6.09% | motif file (matrix) |
svg |
41 |
| Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer | 1e-2 | -5.320e+00 | 0.0434 | 50.0 | 5.30% | 1709.5 | 3.60% | motif file (matrix) |
svg |
42 |
| Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer | 1e-2 | -5.290e+00 | 0.0437 | 17.0 | 1.80% | 418.4 | 0.88% | motif file (matrix) |
svg |
43 |
| Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer | 1e-2 | -5.183e+00 | 0.0475 | 163.0 | 17.29% | 6787.7 | 14.28% | motif file (matrix) |
svg |
44 |
| NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer | 1e-2 | -4.851e+00 | 0.0647 | 107.0 | 11.35% | 4267.5 | 8.98% | motif file (matrix) |
svg |
45 |
| HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer | 1e-2 | -4.785e+00 | 0.0676 | 22.0 | 2.33% | 626.2 | 1.32% | motif file (matrix) |
svg |
46 |
| HEB(bHLH)/mES-Heb-ChIP-Seq(GSE53233)/Homer | 1e-2 | -4.719e+00 | 0.0706 | 146.0 | 15.48% | 6082.2 | 12.79% | motif file (matrix) |
svg |
47 |
| Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer | 1e-2 | -4.684e+00 | 0.0716 | 22.0 | 2.33% | 633.0 | 1.33% | motif file (matrix) |
svg |