Information for 4-CACGBGAGAGGGA (Motif 6)

A G T C C G T A A T G C C T A G A C T G A C T G C G T A A C T G C G T A A T C G C T A G A C T G C G T A
Reverse Opposite:
A C G T A G T C A G T C A T G C C G A T A G T C A C G T A G T C T A G C A G T C A T C G A C G T A C T G
p-value:1e-11
log p-value:-2.599e+01
Information Content per bp:1.865
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.64%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets56.3 +/- 22.1bp
Average Position of motif in Background47.4 +/- 36.8bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Id2/MA0617.1/Jaspar

Match Rank:1
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-CACGBGAGAGGGA
GCACGTGA------
 A C G T A G T C C G T A A T G C C T A G A C T G A C T G C G T A A C T G C G T A A T C G C T A G A C T G C G T A
T C A G A G T C C G T A A G T C A C T G A C G T A C T G C T G A A C G T A C G T A C G T A C G T A C G T A C G T

Arntl/MA0603.1/Jaspar

Match Rank:2
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-CACGBGAGAGGGA
NCACGTGACN----
 A C G T A G T C C G T A A T G C C T A G A C T G A C T G C G T A A C T G C G T A A T C G C T A G A C T G C G T A
C T A G G T A C C T G A A G T C T C A G C G A T A C T G G T C A A G T C G T A C A C G T A C G T A C G T A C G T

TFEC/MA0871.1/Jaspar

Match Rank:3
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--CACGBGAGAGGGA
ATCACGTGAC-----
 A C G T A C G T A G T C C G T A A T G C C T A G A C T G A C T G C G T A A C T G C G T A A T C G C T A G A C T G C G T A
T C G A C A G T G T A C C G T A A G T C T C A G G A C T A C T G T C G A A G T C A C G T A C G T A C G T A C G T A C G T

PB0007.1_Bhlhb2_1/Jaspar

Match Rank:4
Score:0.66
Offset:-8
Orientation:forward strand
Alignment:--------CACGBGAGAGGGA-
GGAAGAGTCACGTGACCAATAC
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A T G C C T A G A C T G A C T G C G T A A C T G C G T A A T C G C T A G A C T G C G T A A C G T
C T A G C T A G G C T A C G T A A C T G C T G A C T A G C A G T G T A C C T G A A G T C T C A G G A C T A C T G G T C A A T G C A G T C G T C A T C G A G A C T C G T A G A T C

BHLHE40/MA0464.2/Jaspar

Match Rank:5
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--CACGBGAGAGGGA
GTCACGTGAN-----
 A C G T A C G T A G T C C G T A A T G C C T A G A C T G A C T G C G T A A C T G C G T A A T C G C T A G A C T G C G T A
C T A G C A G T T G A C C T G A A G T C C T A G A C G T C A T G G T C A A C G T A C G T A C G T A C G T A C G T A C G T

TFE3/MA0831.1/Jaspar

Match Rank:6
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--CACGBGAGAGGGA
ATCACGTGAC-----
 A C G T A C G T A G T C C G T A A T G C C T A G A C T G A C T G C G T A A C T G C G T A A T C G C T A G A C T G C G T A
T C G A A G C T A T G C G C T A A G T C T C A G G C A T A C T G T G C A G A T C A C G T A C G T A C G T A C G T A C G T

USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---CACGBGAGAGGGA
GGTCACGTGA------
 A C G T A C G T A C G T A G T C C G T A A T G C C T A G A C T G A C T G C G T A A C T G C G T A A T C G C T A G A C T G C G T A
T A C G T C A G A G C T A T G C C G T A A G T C T C A G A C G T A C T G T C G A A C G T A C G T A C G T A C G T A C G T A C G T

Arnt/MA0004.1/Jaspar

Match Rank:8
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:CACGBGAGAGGGA
CACGTG-------
 A G T C C G T A A T G C C T A G A C T G A C T G C G T A A C T G C G T A A T C G C T A G A C T G C G T A
A G T C C G T A A G T C A C T G A G C T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZBTB33/MA0527.1/Jaspar

Match Rank:9
Score:0.64
Offset:-5
Orientation:reverse strand
Alignment:-----CACGBGAGAGGGA
NAGNTCTCGCGAGAN---
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A T G C C T A G A C T G A C T G C G T A A C T G C G T A A T C G C T A G A C T G C G T A
T A G C T C G A T C A G T C G A A G C T T G A C A G C T A G T C C T A G G A T C A C T G C T G A A C T G T C G A T C A G A C G T A C G T A C G T

NPAS(bHLH)/Liver-NPAS-ChIP-Seq(GSE39860)/Homer

Match Rank:10
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--CACGBGAGAGGGA
NVCACGTG-------
 A C G T A C G T A G T C C G T A A T G C C T A G A C T G A C T G C G T A A C T G C G T A A T C G C T A G A C T G C G T A
C G A T T G C A G T A C C G T A A G T C C T A G G A C T C A T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T