Information for 2-GAGAGGCTGGAAT (Motif 4)

A C T G C G T A A C T G C G T A A T C G A C T G A G T C A C G T A C T G A C T G C G T A C T G A A G C T
Reverse Opposite:
C T G A A G C T A C G T A G T C A G T C C G T A A C T G A G T C A T G C A C G T A G T C C G A T A G T C
p-value:1e-13
log p-value:-3.117e+01
Information Content per bp:1.938
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.74%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets38.4 +/- 27.1bp
Average Position of motif in Background55.6 +/- 14.3bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:1
Score:0.63
Offset:2
Orientation:forward strand
Alignment:GAGAGGCTGGAAT
--CWGGCGGGAA-
 A C T G C G T A A C T G C G T A A T C G A C T G A G T C A C G T A C T G A C T G C G T A C T G A A G C T
A C G T A C G T T A G C C G A T T A C G A C T G A G T C A C T G A T C G A T C G C G T A C T G A A C G T

TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer

Match Rank:2
Score:0.62
Offset:5
Orientation:forward strand
Alignment:GAGAGGCTGGAAT--
-----CCWGGAATGY
 A C T G C G T A A C T G C G T A A T C G A C T G A G T C A C G T A C T G A C T G C G T A C T G A A G C T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T G C G A T C C G A T C T A G A C T G G C T A C G T A A G C T A C T G A G C T

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:3
Score:0.60
Offset:5
Orientation:forward strand
Alignment:GAGAGGCTGGAAT--
-----NCTGGAATGC
 A C T G C G T A A C T G C G T A A T C G A C T G A G T C A C G T A C T G A C T G C G T A C T G A A G C T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G A T C G T A C C G A T A C T G A C T G C G T A C G T A A C G T A C T G G A T C

PB0029.1_Hic1_1/Jaspar

Match Rank:4
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GAGAGGCTGGAAT---
NGTAGGTTGGCATNNN
 A C T G C G T A A C T G C G T A A T C G A C T G A G T C A C G T A C T G A C T G C G T A C T G A A G C T A C G T A C G T A C G T
C T A G C T A G A G C T C G T A T C A G T C A G A C G T C A G T A C T G A T C G A G T C C G T A G A C T T G C A T C A G G C A T

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.59
Offset:4
Orientation:forward strand
Alignment:GAGAGGCTGGAAT-
----GGCGGGAARN
 A C T G C G T A A C T G C G T A A T C G A C T G A G T C A C G T A C T G A C T G C G T A C T G A A G C T A C G T
A C G T A C G T A C G T A C G T T A C G T A C G G T A C A T C G A C T G T A C G T C G A C T G A T C G A A T C G

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:6
Score:0.58
Offset:5
Orientation:forward strand
Alignment:GAGAGGCTGGAAT--
-----CCWGGAATGY
 A C T G C G T A A C T G C G T A A T C G A C T G A G T C A C G T A C T G A C T G C G T A C T G A A G C T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T A G C T A G C G C A T C A T G A C T G G C T A C G T A A C G T A C T G G A T C

E2F6/MA0471.1/Jaspar

Match Rank:7
Score:0.58
Offset:3
Orientation:forward strand
Alignment:GAGAGGCTGGAAT-
---GGGCGGGAAGG
 A C T G C G T A A C T G C G T A A T C G A C T G A G T C A C G T A C T G A C T G C G T A C T G A A G C T A C G T
A C G T A C G T A C G T C T A G T C A G A C T G G T A C C T A G A C T G T A C G C G T A C T G A T C A G T C A G

E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer

Match Rank:8
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:GAGAGGCTGGAAT--
---TGGCGGGAAAHB
 A C T G C G T A A C T G C G T A A T C G A C T G A G T C A C G T A C T G A C T G C G T A C T G A A G C T A C G T A C G T
A C G T A C G T A C G T C G A T T A C G A T C G G T A C A C T G A T C G A C T G C T G A C T G A T G C A G C T A A T C G

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:9
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---GAGAGGCTGGAAT
CTTGAGTGGCT-----
 A C G T A C G T A C G T A C T G C G T A A C T G C G T A A T C G A C T G A G T C A C G T A C T G A C T G C G T A C T G A A G C T
A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T A C G T A C G T A C G T A C G T A C G T

E2F4/MA0470.1/Jaspar

Match Rank:10
Score:0.57
Offset:3
Orientation:forward strand
Alignment:GAGAGGCTGGAAT-
---GGGCGGGAAGG
 A C T G C G T A A C T G C G T A A T C G A C T G A G T C A C G T A C T G A C T G C G T A C T G A A G C T A C G T
A C G T A C G T A C G T A C T G T A C G A T C G A G T C A C T G T A C G T A C G C T G A C T G A T C A G T C A G