Information for 3-TTTGAAGGCA (Motif 13)

A C G T A C G T A C G T A T C G T G C A C G T A C T A G A T C G T A G C C G T A
Reverse Opposite:
C G A T A T C G A T G C A G T C A C G T A C G T A T G C C G T A C G T A G T C A
p-value:1e-9
log p-value:-2.161e+01
Information Content per bp:1.848
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.48%
Number of Background Sequences with motif72.2
Percentage of Background Sequences with motif0.15%
Average Position of motif in Targets44.6 +/- 31.3bp
Average Position of motif in Background50.2 +/- 30.5bp
Strand Bias (log2 ratio + to - strand density)1.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:1
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:TTTGAAGGCA
TTTGAAACCG
 A C G T A C G T A C G T A T C G T G C A C G T A C T A G A T C G T A G C C G T A
A C G T A C G T A C G T T A C G C G T A C T G A C G T A G T A C A G T C A T C G

LIN54/MA0619.1/Jaspar

Match Rank:2
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-TTTGAAGGCA
ATTTGAATT--
 A C G T A C G T A C G T A C G T A T C G T G C A C G T A C T A G A T C G T A G C C G T A
C G T A A C G T A C G T A G C T C T A G C G T A C G T A G A C T G A C T A C G T A C G T

Bcl6/MA0463.1/Jaspar

Match Rank:3
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---TTTGAAGGCA-
NGCTTTCTAGGAAN
 A C G T A C G T A C G T A C G T A C G T A C G T A T C G T G C A C G T A C T A G A T C G T A G C C G T A A C G T
C G A T C A T G G T A C G A C T A G C T G A C T A G T C A G C T C G T A C T A G C A T G T C G A G C T A G T C A

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:4
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--TTTGAAGGCA
CCTTTGATGT--
 A C G T A C G T A C G T A C G T A C G T A T C G T G C A C G T A C T A G A T C G T A G C C G T A
A T G C A G T C A C G T A C G T A C G T A T C G C G T A C G A T T A C G G A C T A C G T A C G T

Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer

Match Rank:5
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----TTTGAAGGCA-
NNNCTTTCCAGGAAA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G T G C A C G T A C T A G A T C G T A G C C G T A A C G T
G A C T C G A T T C A G G A T C G A C T A G C T A G C T A G T C G A T C C G T A C T A G C T A G T C G A T C G A C T G A

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:6
Score:0.60
Offset:4
Orientation:forward strand
Alignment:TTTGAAGGCA-----
----AAGGCAAGTGT
 A C G T A C G T A C G T A T C G T G C A C G T A C T A G A T C G T A G C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:7
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--TTTGAAGGCA
CCTTTGAWGT--
 A C G T A C G T A C G T A C G T A C G T A T C G T G C A C G T A C T A G A T C G T A G C C G T A
A T G C A G T C A C G T A C G T A C G T A C T G C G T A C G T A A T C G A C G T A C G T A C G T

PB0006.1_Bcl6b_1/Jaspar

Match Rank:8
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--TTTGAAGGCA----
TCTTTCGAGGAATTTG
 A C G T A C G T A C G T A C G T A C G T A T C G T G C A C G T A C T A G A T C G T A G C C G T A A C G T A C G T A C G T A C G T
C G A T G A T C G A C T C G A T C G A T A G T C A C T G C G T A T C A G C A T G C G T A G C T A G A C T G C A T G A C T T A C G

STAT1/MA0137.3/Jaspar

Match Rank:9
Score:0.58
Offset:0
Orientation:forward strand
Alignment:TTTGAAGGCA-
TTTCCAGGAAA
 A C G T A C G T A C G T A T C G T G C A C G T A C T A G A T C G T A G C C G T A A C G T
A C G T A G C T A C G T T G A C G A T C C T G A C T A G C A T G C T G A G T C A C T G A

THAP1/MA0597.1/Jaspar

Match Rank:10
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:TTTGAAGGCA-
--TNNGGGCAG
 A C G T A C G T A C G T A T C G T G C A C G T A C T A G A T C G T A G C C G T A A C G T
A C G T A C G T C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G