Information for 16-RGGCCTCTGCCAA (Motif 25)

C T A G A T C G T A C G A G T C G T A C G C A T A G T C A C G T A C T G A G T C A G T C G T C A C T G A
Reverse Opposite:
A G C T A C G T C T A G A C T G A G T C C G T A A C T G C G T A A C T G A C T G A G T C A T G C A G C T
p-value:1e-8
log p-value:-1.868e+01
Information Content per bp:1.810
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif0.97%
Number of Background Sequences with motif15.7
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets43.6 +/- 20.6bp
Average Position of motif in Background56.6 +/- 26.4bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIA/MA0670.1/Jaspar

Match Rank:1
Score:0.70
Offset:5
Orientation:forward strand
Alignment:RGGCCTCTGCCAA--
-----GGTGCCAAGT
 C T A G A T C G T A C G A G T C G T A C G C A T A G T C A C G T A C T G A G T C A G T C G T C A C T G A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.69
Offset:6
Orientation:forward strand
Alignment:RGGCCTCTGCCAA-
------TTGCCAAG
 C T A G A T C G T A C G A G T C G T A C G C A T A G T C A C G T A C T G A G T C A G T C G T C A C T G A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G

NFIC/MA0161.1/Jaspar

Match Rank:3
Score:0.68
Offset:7
Orientation:reverse strand
Alignment:RGGCCTCTGCCAA
-------TGCCAA
 C T A G A T C G T A C G A G T C G T A C G C A T A G T C A C G T A C T G A G T C A G T C G T C A C T G A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A

NFIX/MA0671.1/Jaspar

Match Rank:4
Score:0.68
Offset:5
Orientation:forward strand
Alignment:RGGCCTCTGCCAA-
-----CGTGCCAAG
 C T A G A T C G T A C G A G T C G T A C G C A T A G T C A C G T A C T G A G T C A G T C G T C A C T G A A C G T
A C G T A C G T A C G T A C G T A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G

Hic1/MA0739.1/Jaspar

Match Rank:5
Score:0.63
Offset:6
Orientation:forward strand
Alignment:RGGCCTCTGCCAA--
------ATGCCAACC
 C T A G A T C G T A C G A G T C G T A C G C A T A G T C A C G T A C T G A G T C A G T C G T C A C T G A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:6
Score:0.61
Offset:0
Orientation:forward strand
Alignment:RGGCCTCTGCCAA
SNGCACCTGCHS-
 C T A G A T C G T A C G A G T C G T A C G C A T A G T C A C G T A C T G A G T C A G T C G T C A C T G A
T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C A C G T

INSM1/MA0155.1/Jaspar

Match Rank:7
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:RGGCCTCTGCCAA
CGCCCCCTGACA-
 C T A G A T C G T A C G A G T C G T A C G C A T A G T C A C G T A C T G A G T C A G T C G T C A C T G A
G A T C C T A G T G A C A G T C A G T C A T G C A G T C C G A T C A T G T C G A G T A C G T C A A C G T

NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:8
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--RGGCCTCTGCCAA-
TTGGCANNNTGCCAAG
 A C G T A C G T C T A G A T C G T A C G A G T C G T A C G C A T A G T C A C G T A C T G A G T C A G T C G T C A C T G A A C G T
G A C T C A G T A C T G C T A G T G A C G C T A T A G C C G T A T A C G C G A T A C T G G A T C G T A C G T C A C T G A T C A G

Myb/MA0100.2/Jaspar

Match Rank:9
Score:0.60
Offset:2
Orientation:forward strand
Alignment:RGGCCTCTGCCAA
--CCAACTGCCA-
 C T A G A T C G T A C G A G T C G T A C G C A T A G T C A C G T A C T G A G T C A G T C G T C A C T G A
A C G T A C G T A G T C G A T C C G T A C T G A A G T C C G A T A C T G G A T C G T A C G C T A A C G T

THAP1/MA0597.1/Jaspar

Match Rank:10
Score:0.59
Offset:6
Orientation:forward strand
Alignment:RGGCCTCTGCCAA--
------CTGCCCGCA
 C T A G A T C G T A C G A G T C G T A C G C A T A G T C A C G T A C T G A G T C A G T C G T C A C T G A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A