Information for 9-GCTGCCAGCT (Motif 17)

A T C G T A G C C A G T A C T G G A T C A T G C C G T A T C A G T G A C G A C T
Reverse Opposite:
C T G A A C T G A G T C G C A T T A C G C T A G T G A C G T C A A T C G T A G C
p-value:1e-9
log p-value:-2.200e+01
Information Content per bp:1.650
Number of Target Sequences with motif96.0
Percentage of Target Sequences with motif10.31%
Number of Background Sequences with motif1315.0
Percentage of Background Sequences with motif5.20%
Average Position of motif in Targets49.4 +/- 29.1bp
Average Position of motif in Background50.0 +/- 28.4bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:1
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:GCTGCCAGCT
VBTGWCAGCB
 A T C G T A G C C A G T A C T G G A T C A T G C C G T A T C A G T G A C G A C T
T C A G A T G C A C G T A C T G C G T A A G T C C G T A A T C G A T G C A G T C

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.68
Offset:1
Orientation:forward strand
Alignment:GCTGCCAGCT
-TTGCCAAG-
 A T C G T A G C C A G T A C T G G A T C A T G C C G T A T C A G T G A C G A C T
A C G T A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G A C G T

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:3
Score:0.68
Offset:2
Orientation:forward strand
Alignment:GCTGCCAGCT
--TGTCANYT
 A T C G T A G C C A G T A C T G G A T C A T G C C G T A T C A G T G A C G A C T
A C G T A C G T A G C T C A T G G C A T G A T C T G C A C T A G G A T C A C G T

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:4
Score:0.66
Offset:4
Orientation:reverse strand
Alignment:GCTGCCAGCT----
----CCAGCTGTTN
 A T C G T A G C C A G T A C T G G A T C A T G C C G T A T C A G T G A C G A C T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T G A C G T A C C T G A A C T G T G A C G C A T C A T G A C G T A C G T G C T A

YY1(Zf)/Promoter/Homer

Match Rank:5
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:GCTGCCAGCT--
GCCGCCATCTTG
 A T C G T A G C C A G T A C T G G A T C A T G C C G T A T C A G T G A C G A C T A C G T A C G T
C A T G G A T C A T G C C T A G A G T C A G T C C G T A A C G T A T G C A G C T A C G T A T C G

Hic1/MA0739.1/Jaspar

Match Rank:6
Score:0.65
Offset:1
Orientation:forward strand
Alignment:GCTGCCAGCT
-ATGCCAACC
 A T C G T A G C C A G T A C T G G A T C A T G C C G T A T C A G T G A C G A C T
A C G T T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:7
Score:0.65
Offset:4
Orientation:reverse strand
Alignment:GCTGCCAGCT----
----HCAGCTGDTN
 A T C G T A G C C A G T A C T G G A T C A T G C C G T A T C A G T G A C G A C T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G T C A A G T C C G T A A C T G G T A C G C A T C T A G C G A T A C G T C A G T

Myb/MA0100.2/Jaspar

Match Rank:8
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:GCTGCCAGCT--
--TGGCAGTTGN
 A T C G T A G C C A G T A C T G G A T C A T G C C G T A T C A G T G A C G A C T A C G T A C G T
A C G T A C G T C G A T A C T G C T A G A G T C C G T A A C T G A G C T A C G T C T A G T C A G

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:9
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---GCTGCCAGCT
GGTGYTGACAGS-
 A C G T A C G T A C G T A T C G T A G C C A G T A C T G G A T C A T G C C G T A T C A G T G A C G A C T
T C A G A T C G G A C T A C T G G A C T C A G T C T A G C G T A G T A C C G T A C T A G A T C G A C G T

NFIX/MA0671.1/Jaspar

Match Rank:10
Score:0.63
Offset:0
Orientation:forward strand
Alignment:GCTGCCAGCT
CGTGCCAAG-
 A T C G T A G C C A G T A C T G G A T C A T G C C G T A T C A G T G A C G A C T
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T