Information for 10-CTCCTGMTTGGGT (Motif 15)

A G T C A C G T A G T C A G T C A G C T A T C G G T C A A C G T C A G T A C T G A T C G A T C G A C G T
Reverse Opposite:
G T C A A T G C A T G C A G T C G C T A C G T A A C G T A T G C C T G A A C T G A C T G C G T A A C T G
p-value:1e-9
log p-value:-2.231e+01
Information Content per bp:1.837
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.64%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets54.7 +/- 26.2bp
Average Position of motif in Background43.5 +/- 19.6bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:1
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-CTCCTGMTTGGGT
CCCCCTGCTGTG--
 A C G T A G T C A C G T A G T C A G T C A G C T A T C G G T C A A C G T C A G T A C T G A T C G A T C G A C G T
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T A C G T

NFYB/MA0502.1/Jaspar

Match Rank:2
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:CTCCTGMTTGGGT-----
---CTGATTGGTCNATTT
 A G T C A C G T A G T C A G T C A G C T A T C G G T C A A C G T C A G T A C T G A T C G A T C G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A T G C A G C T A T C G C G T A A G C T A C G T A C T G A C T G G A C T A G T C T A G C T C G A C A G T C A G T A G C T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:3
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---CTCCTGMTTGGGT
GGCCYCCTGCTGDGH-
 A C G T A C G T A C G T A G T C A C G T A G T C A G T C A G C T A T C G G T C A A C G T C A G T A C T G A T C G A T C G A C G T
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C A C G T

NFYA/MA0060.2/Jaspar

Match Rank:4
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---CTCCTGMTTGGGT--
AGAGTGCTGATTGGTCCA
 A C G T A C G T A C G T A G T C A C G T A G T C A G T C A G C T A T C G G T C A A C G T C A G T A C T G A T C G A T C G A C G T A C G T A C G T
G C T A C A T G T G C A T A C G G A C T A C T G A G T C A G C T A T C G C T G A A G C T C G A T T C A G T A C G G A C T A G T C T A G C T C G A

NFY(CCAAT)/Promoter/Homer

Match Rank:5
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:CTCCTGMTTGGGT
---CCGATTGGCT
 A G T C A C G T A G T C A G T C A G C T A T C G G T C A A C G T C A G T A C T G A T C G A T C G A C G T
A C G T A C G T A C G T A T G C A G T C A T C G C G T A A C G T A C G T A C T G A C T G G A T C A G C T

PB0206.1_Zic2_2/Jaspar

Match Rank:6
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CTCCTGMTTGGGT-
TCNCCTGCTGNGNNN
 A C G T A G T C A C G T A G T C A G T C A G C T A T C G G T C A A C G T C A G T A C T G A T C G A T C G A C G T A C G T
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G

PB0205.1_Zic1_2/Jaspar

Match Rank:7
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CTCCTGMTTGGGT-
TNTCCTGCTGTGNNG
 A C G T A G T C A C G T A G T C A G T C A G C T A T C G G T C A A C G T C A G T A C T G A T C G A T C G A C G T A C G T
G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G

PH0026.1_Duxbl/Jaspar

Match Rank:8
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CTCCTGMTTGGGT--
NNNNGTTGATTGGGTCG
 A C G T A C G T A G T C A C G T A G T C A G T C A G C T A T C G G T C A A C G T C A G T A C T G A T C G A T C G A C G T A C G T A C G T
A T G C C G T A A G T C A G T C T C A G G A C T C G A T C T A G C T G A A C G T A C G T C T A G T C A G T C A G G A C T G A T C T C A G

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:9
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CTCCTGMTTGGGT
ACATCCTGNT-----
 A C G T A C G T A G T C A C G T A G T C A G T C A G C T A T C G G T C A A C G T C A G T A C T G A T C G A T C G A C G T
C T G A A T G C C G T A A C G T A G T C A G T C A C G T A C T G A T C G G C A T A C G T A C G T A C G T A C G T A C G T

Dux/MA0611.1/Jaspar

Match Rank:10
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:CTCCTGMTTGGGT
---TTGATTGN--
 A G T C A C G T A G T C A G T C A G C T A T C G G T C A A C G T C A G T A C T G A T C G A T C G A C G T
A C G T A C G T A C G T G A C T A C G T A C T G C G T A A C G T A C G T C T A G A T C G A C G T A C G T