p-value: | 1e-11 |
log p-value: | -2.610e+01 |
Information Content per bp: | 1.707 |
Number of Target Sequences with motif | 11.0 |
Percentage of Target Sequences with motif | 1.18% |
Number of Background Sequences with motif | 13.3 |
Percentage of Background Sequences with motif | 0.05% |
Average Position of motif in Targets | 57.8 +/- 25.3bp |
Average Position of motif in Background | 50.1 +/- 24.1bp |
Strand Bias (log2 ratio + to - strand density) | 0.3 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer
Match Rank: | 1 |
Score: | 0.82 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | TGGCTGSAAGCCAGAC TGGCAGNCTGCCAG-- |
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NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer
Match Rank: | 2 |
Score: | 0.79 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -TGGCTGSAAGCCAGAC TTGGCANNNTGCCAAG- |
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NFIC::TLX1/MA0119.1/Jaspar
Match Rank: | 3 |
Score: | 0.74 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | TGGCTGSAAGCCAGAC TGGCACCATGCCAA-- |
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Hand1::Tcf3/MA0092.1/Jaspar
Match Rank: | 4 |
Score: | 0.63 |
Offset: | 7 |
Orientation: | reverse strand |
Alignment: | TGGCTGSAAGCCAGAC- -------ATGCCAGACN |
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Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer
Match Rank: | 5 |
Score: | 0.58 |
Offset: | 10 |
Orientation: | reverse strand |
Alignment: | TGGCTGSAAGCCAGAC-- ----------CCAGACAG |
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PB0060.1_Smad3_1/Jaspar
Match Rank: | 6 |
Score: | 0.58 |
Offset: | 5 |
Orientation: | forward strand |
Alignment: | TGGCTGSAAGCCAGAC------ -----CAAATCCAGACATCACA |
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Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer
Match Rank: | 7 |
Score: | 0.57 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -TGGCTGSAAGCCAGAC TWGTCTGV--------- |
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Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer
Match Rank: | 8 |
Score: | 0.57 |
Offset: | 10 |
Orientation: | reverse strand |
Alignment: | TGGCTGSAAGCCAGAC---- ----------CCAGACRSVB |
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ZNF322(Zf)/HEK293-ZNF322.GFP-ChIP-Seq(GSE58341)/Homer
Match Rank: | 9 |
Score: | 0.56 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --TGGCTGSAAGCCAGAC-- YCAGGCWCAGTACCAGGCTC |
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POL010.1_DCE_S_III/Jaspar
Match Rank: | 10 |
Score: | 0.55 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | TGGCTGSAAGCCAGAC -NGCTN---------- |
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