Information for 1-YGCCAYCTGGTGG (Motif 1)

G A C T A C T G A G T C T A G C G T C A G A T C G T A C A C G T A C T G A T C G A G C T T A C G T C A G
Reverse Opposite:
A G T C A G T C C T G A T A G C T G A C G T C A C A T G C T A G A C G T A T C G C T A G A G T C C T G A
p-value:1e-21
log p-value:-4.893e+01
Information Content per bp:1.645
Number of Target Sequences with motif40.0
Percentage of Target Sequences with motif4.30%
Number of Background Sequences with motif146.2
Percentage of Background Sequences with motif0.58%
Average Position of motif in Targets47.0 +/- 24.9bp
Average Position of motif in Background54.3 +/- 26.5bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:1
Score:0.87
Offset:-4
Orientation:forward strand
Alignment:----YGCCAYCTGGTGG---
ANAGTGCCACCTGGTGGCCA
 A C G T A C G T A C G T A C G T G A C T A C T G A G T C T A G C G T C A G A T C G T A C A C G T A C T G A T C G A G C T T A C G T C A G A C G T A C G T A C G T
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.86
Offset:-6
Orientation:forward strand
Alignment:------YGCCAYCTGGTGG-
CNNBRGCGCCCCCTGSTGGC
 A C G T A C G T A C G T A C G T A C G T A C G T G A C T A C T G A G T C T A G C G T C A G A T C G T A C A C G T A C T G A T C G A G C T T A C G T C A G A C G T
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

CTCF/MA0139.1/Jaspar

Match Rank:3
Score:0.86
Offset:-3
Orientation:reverse strand
Alignment:---YGCCAYCTGGTGG---
TAGCGCCCCCTGGTGGCCA
 A C G T A C G T A C G T G A C T A C T G A G T C T A G C G T C A G A T C G T A C A C G T A C T G A T C G A G C T T A C G T C A G A C G T A C G T A C G T
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:4
Score:0.64
Offset:1
Orientation:forward strand
Alignment:YGCCAYCTGGTGG
-GCCATCTGTT--
 G A C T A C T G A G T C T A G C G T C A G A T C G T A C A C G T A C T G A T C G A G C T T A C G T C A G
A C G T T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T A C G T A C G T

Hic1/MA0739.1/Jaspar

Match Rank:5
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-YGCCAYCTGGTGG
ATGCCAACC-----
 A C G T G A C T A C T G A G T C T A G C G T C A G A T C G T A C A C G T A C T G A T C G A G C T T A C G T C A G
T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C A C G T A C G T A C G T A C G T A C G T

YY1(Zf)/Promoter/Homer

Match Rank:6
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--YGCCAYCTGGTGG
GCCGCCATCTTG---
 A C G T A C G T G A C T A C T G A G T C T A G C G T C A G A T C G T A C A C G T A C T G A T C G A G C T T A C G T C A G
C A T G G A T C A T G C C T A G A G T C A G T C C G T A A C G T A T G C A G C T A C G T A T C G A C G T A C G T A C G T

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:7
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-YGCCAYCTGGTGG
NTGCCCANNGGTNA
 A C G T G A C T A C T G A G T C T A G C G T C A G A T C G T A C A C G T A C T G A T C G A G C T T A C G T C A G
T G A C G C A T T C A G G T A C G A T C A G T C C G T A T A C G T C G A C T A G T C A G G A C T C A T G C T G A

PB0191.1_Tcfap2c_2/Jaspar

Match Rank:8
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-YGCCAYCTGGTGG
NTGCCCTTGGGCGN
 A C G T G A C T A C T G A G T C T A G C G T C A G A T C G T A C A C G T A C T G A T C G A G C T T A C G T C A G
G A T C G C A T T C A G G T A C G A T C G A T C C G A T G A C T C T A G C T A G C A T G A G T C C T A G T A C G

PB0076.1_Sp4_1/Jaspar

Match Rank:9
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----YGCCAYCTGGTGG
GGTCCCGCCCCCTTCTC-
 A C G T A C G T A C G T A C G T A C G T G A C T A C T G A G T C T A G C G T C A G A T C G T A C A C G T A C T G A T C G A G C T T A C G T C A G
A C T G C A T G G A C T G T A C G T A C A G T C C T A G A G T C A T G C A G T C G T A C A G T C G A C T G A C T T A G C A G C T A G T C A C G T

YY1/MA0095.2/Jaspar

Match Rank:10
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--YGCCAYCTGGTGG
GCNGCCATCTTG---
 A C G T A C G T G A C T A C T G A G T C T A G C G T C A G A T C G T A C A C G T A C T G A T C G A G C T T A C G T C A G
C A T G A G T C T G A C C A T G A G T C A G T C C T G A A C G T A G T C A G C T G A C T A C T G A C G T A C G T A C G T