Information for 6-AAACCACAAG (Motif 4)

C G T A C G T A G C T A G T A C G T A C G C T A A T G C G C T A C T G A T A C G
Reverse Opposite:
A T G C G A C T C G A T T A C G C G A T C A T G C A T G C G A T G C A T G C A T
p-value:1e-20
log p-value:-4.656e+01
Information Content per bp:1.662
Number of Target Sequences with motif69.0
Percentage of Target Sequences with motif9.04%
Number of Background Sequences with motif1099.0
Percentage of Background Sequences with motif2.34%
Average Position of motif in Targets55.4 +/- 23.9bp
Average Position of motif in Background48.9 +/- 28.6bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:1
Score:0.92
Offset:0
Orientation:forward strand
Alignment:AAACCACAAG
AAACCACANN
 C G T A C G T A G C T A G T A C G T A C G C T A A T G C G C T A C T G A T A C G
G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:2
Score:0.90
Offset:-1
Orientation:forward strand
Alignment:-AAACCACAAG
NAAACCACAG-
 A C G T C G T A C G T A G C T A G T A C G T A C G C T A A T G C G C T A C T G A T A C G
T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:3
Score:0.89
Offset:0
Orientation:reverse strand
Alignment:AAACCACAAG-
AAACCACAGAN
 C G T A C G T A G C T A G T A C G T A C G C T A A T G C G C T A C T G A T A C G A C G T
G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:4
Score:0.87
Offset:0
Orientation:reverse strand
Alignment:AAACCACAAG
AAACCACAGC
 C G T A C G T A G C T A G T A C G T A C G C T A A T G C G C T A C T G A T A C G
G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:5
Score:0.87
Offset:-1
Orientation:forward strand
Alignment:-AAACCACAAG-
NWAACCACADNN
 A C G T C G T A C G T A G C T A G T A C G T A C G C T A A T G C G C T A C T G A T A C G A C G T
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

RUNX2/MA0511.2/Jaspar

Match Rank:6
Score:0.86
Offset:0
Orientation:forward strand
Alignment:AAACCACAAG
AAACCGCAA-
 C G T A C G T A G C T A G T A C G T A C G C T A A T G C G C T A C T G A T A C G
G C T A C T G A G T C A A G T C A G T C C T A G A G T C T G C A T C G A A C G T

RUNX3/MA0684.1/Jaspar

Match Rank:7
Score:0.85
Offset:0
Orientation:forward strand
Alignment:AAACCACAAG
AAACCGCAAA
 C G T A C G T A G C T A G T A C G T A C G C T A A T G C G C T A C T G A T A C G
G C T A T C G A T G C A G T A C A T G C T C A G A T G C T G C A T C G A G C T A

FOXH1/MA0479.1/Jaspar

Match Rank:8
Score:0.73
Offset:-3
Orientation:forward strand
Alignment:---AAACCACAAG
TCCAATCCACA--
 A C G T A C G T A C G T C G T A C G T A G C T A G T A C G T A C G C T A A T G C G C T A C T G A T A C G
A G C T A G T C T A G C C G T A C G T A A C G T G T A C G T A C C G T A A G T C C G T A A C G T A C G T

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--AAACCACAAG
SSAATCCACANN
 A C G T A C G T C G T A C G T A G C T A G T A C G T A C G C T A A T G C G C T A C T G A T A C G
A T G C T A G C C T G A C G T A A C G T G T A C G T A C C T G A A G T C C G T A C T G A G T A C

ZNF354C/MA0130.1/Jaspar

Match Rank:10
Score:0.65
Offset:1
Orientation:forward strand
Alignment:AAACCACAAG
-ATCCAC---
 C G T A C G T A G C T A G T A C G T A C G C T A A T G C G C T A C T G A T A C G
A C G T T G C A G C A T A G T C A G T C C G T A A T G C A C G T A C G T A C G T