Information for 13-CACTAATTGGTCT (Motif 16)

A G T C C G T A A G T C A C G T C G T A C G T A A G C T A C G T A C T G A C T G C G A T A G T C A C G T
Reverse Opposite:
C G T A A C T G C G T A G T A C A G T C C G T A C T G A A C G T C G A T C G T A A C T G A C G T A C T G
p-value:1e-8
log p-value:-1.967e+01
Information Content per bp:1.931
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.52%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets42.5 +/- 22.7bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0107.1_Msx2/Jaspar

Match Rank:1
Score:0.83
Offset:-2
Orientation:reverse strand
Alignment:--CACTAATTGGTCT--
ANCGCTAATTGGTCTNN
 A C G T A C G T A G T C C G T A A G T C A C G T C G T A C G T A A G C T A C G T A C T G A C T G C G A T A G T C A C G T A C G T A C G T
T C G A C T A G G T A C C T A G G T A C G A C T C G T A C G T A A C G T C G A T C T A G T A C G G A C T A T G C G A C T A C G T A G T C

PH0033.1_Gbx1/Jaspar

Match Rank:2
Score:0.72
Offset:-3
Orientation:forward strand
Alignment:---CACTAATTGGTCT-
TGCCACTAATTAGTGTA
 A C G T A C G T A C G T A G T C C G T A A G T C A C G T C G T A C G T A A G C T A C G T A C T G A C T G C G A T A G T C A C G T A C G T
G C A T C T A G A T G C T G A C T C G A G T A C G A C T G T C A C T G A A G C T A C G T C T G A A C T G A C G T A C T G A C G T G C T A

PH0092.1_Lhx2/Jaspar

Match Rank:3
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---CACTAATTGGTCT-
NNNNNCTAATTAGTTTA
 A C G T A C G T A C G T A G T C C G T A A G T C A C G T C G T A C G T A A G C T A C G T A C T G A C T G C G A T A G T C A C G T A C G T
A T C G C A G T A C G T G T A C T C G A G A T C G A C T G T C A C T G A A G C T A C G T C T G A C T A G A G C T C A G T A C G T G C T A

PH0089.1_Isx/Jaspar

Match Rank:4
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--CACTAATTGGTCT-
ACNNCTAATTAGNNNN
 A C G T A C G T A G T C C G T A A G T C A C G T C G T A C G T A A G C T A C G T A C T G A C T G C G A T A G T C A C G T A C G T
G C T A A T G C T A C G T G C A G A T C A G C T G C T A C G T A C G A T C A G T C T G A C T A G A C T G C T G A A C T G C G A T

PH0034.1_Gbx2/Jaspar

Match Rank:5
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---CACTAATTGGTCT-
AANCGCTAATTAGCNNN
 A C G T A C G T A C G T A G T C C G T A A G T C A C G T C G T A C G T A A G C T A C G T A C T G A C T G C G A T A G T C A C G T A C G T
G T C A T G C A G A C T A T G C T C A G A T G C A G C T G T C A G C T A C A G T A C G T C T G A T A C G A G T C A C T G A T G C G C A T

GBX1/MA0889.1/Jaspar

Match Rank:6
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:CACTAATTGGTCT
-GCTAATTAGN--
 A G T C C G T A A G T C A C G T C G T A C G T A A G C T A C G T A C T G A C T G C G A T A G T C A C G T
A C G T T C A G A T G C C G A T C T G A C T G A A C G T A G C T C T G A T A C G A G C T A C G T A C G T

MSX2/MA0708.1/Jaspar

Match Rank:7
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:CACTAATTGGTCT
--NTAATTGG---
 A G T C C G T A A G T C A C G T C G T A C G T A A G C T A C G T A C T G A C T G C G A T A G T C A C G T
A C G T A C G T A G C T C A G T T C G A C G T A A C G T C A G T C T A G A T C G A C G T A C G T A C G T

VENTX/MA0724.1/Jaspar

Match Rank:8
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:CACTAATTGGTCT
--CTAATCGNT--
 A G T C C G T A A G T C A C G T C G T A C G T A A G C T A C G T A C T G A C T G C G A T A G T C A C G T
A C G T A C G T G A T C A C G T C G T A C G T A C A G T A G T C C T A G A C T G G C A T A C G T A C G T

MSX1/MA0666.1/Jaspar

Match Rank:9
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:CACTAATTGGTCT
--NTAATTGG---
 A G T C C G T A A G T C A C G T C G T A C G T A A G C T A C G T A C T G A C T G C G A T A G T C A C G T
A C G T A C G T A G T C A C G T T G C A G T C A A C G T A C G T C T A G T A C G A C G T A C G T A C G T

Nobox/MA0125.1/Jaspar

Match Rank:10
Score:0.67
Offset:3
Orientation:forward strand
Alignment:CACTAATTGGTCT
---TAATTGGT--
 A G T C C G T A A G T C A C G T C G T A C G T A A G C T A C G T A C T G A C T G C G A T A G T C A C G T
A C G T A C G T A C G T A G C T C G T A C G T A A C G T C A G T C T A G A T C G A G C T A C G T A C G T