Information for 7-AGTCATGCATTTD (Motif 7)

C G T A C T A G A C G T A G T C C G T A A C G T A C T G A T G C G T C A C G A T A C G T C G A T C T G A
Reverse Opposite:
G A C T C G T A C G T A C G T A A C G T A T C G G T A C C G T A A C G T A C T G G T C A A G T C A C G T
p-value:1e-11
log p-value:-2.688e+01
Information Content per bp:1.843
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.03%
Number of Background Sequences with motif8.4
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets51.7 +/- 22.8bp
Average Position of motif in Background55.9 +/- 44.1bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MAFG::NFE2L1/MA0089.1/Jaspar

Match Rank:1
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:AGTCATGCATTTD
-GTCATN------
 C G T A C T A G A C G T A G T C C G T A A C G T A C T G A T G C G T C A C G A T A C G T C G A T C T G A
A C G T T C A G A C G T G A T C C G T A A G C T A T C G A C G T A C G T A C G T A C G T A C G T A C G T

Pax2/MA0067.1/Jaspar

Match Rank:2
Score:0.63
Offset:0
Orientation:forward strand
Alignment:AGTCATGCATTTD
AGTCACGC-----
 C G T A C T A G A C G T A G T C C G T A A C G T A C T G A T G C G T C A C G A T A C G T C G A T C T G A
G C T A C T A G G C A T A G T C C T G A G A T C C A T G A T C G A C G T A C G T A C G T A C G T A C G T

PB0028.1_Hbp1_1/Jaspar

Match Rank:3
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---AGTCATGCATTTD
NNCATTCATTCATNNN
 A C G T A C G T A C G T C G T A C T A G A C G T A G T C C G T A A C G T A C T G A T G C G T C A C G A T A C G T C G A T C T G A
T C G A G A C T G T A C C G T A A G C T G A C T T G A C C G T A C G A T G C A T A T G C C G T A C G A T G C T A A C T G C G A T

PB0180.1_Sp4_2/Jaspar

Match Rank:4
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--AGTCATGCATTTD
NNGGCCACGCCTTTN
 A C G T A C G T C G T A C T A G A C G T A G T C C G T A A C G T A C T G A T G C G T C A C G A T A C G T C G A T C T G A
G T A C C A G T C T A G C T A G T G A C G A T C T G C A T G A C A C T G T G A C T A G C A G C T G C A T G C A T T C A G

NFE2/MA0841.1/Jaspar

Match Rank:5
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----AGTCATGCATTTD
GATGAGTCATN------
 A C G T A C G T A C G T A C G T C G T A C T A G A C G T A G T C C G T A A C G T A C T G A T G C G T C A C G A T A C G T C G A T C T G A
T A C G T C G A A C G T C T A G T C G A A T C G C A G T G T A C C T G A A G C T A C T G A C G T A C G T A C G T A C G T A C G T A C G T

JDP2/MA0655.1/Jaspar

Match Rank:6
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---AGTCATGCATTTD
ATGAGTCAT-------
 A C G T A C G T A C G T C G T A C T A G A C G T A G T C C G T A A C G T A C T G A T G C G T C A C G A T A C G T C G A T C T G A
C T G A C G A T C A T G G C T A A T C G G C A T T G A C C T G A A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PH0148.1_Pou3f3/Jaspar

Match Rank:7
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-AGTCATGCATTTD---
AAAATATGCATAATAAA
 A C G T C G T A C T A G A C G T A G T C C G T A A C G T A C T G A T G C G T C A C G A T A C G T C G A T C T G A A C G T A C G T A C G T
G C T A G C T A C T A G C G T A G A C T G C T A G A C T C A T G G T A C C T G A C G A T C G T A G C T A C A G T C T G A C G T A C G T A

Pax6/MA0069.1/Jaspar

Match Rank:8
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-AGTCATGCATTTD
AANTCATGCGTGAA
 A C G T C G T A C T A G A C G T A G T C C G T A A C G T A C T G A T G C G T C A C G A T A C G T C G A T C T G A
G T C A T C G A A G T C G A C T A T G C C T G A C G A T A T C G G A T C C T A G A C G T C T A G C G T A T C G A

JUN(var.2)/MA0489.1/Jaspar

Match Rank:9
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---AGTCATGCATTTD
ATGAGTCATNTNNT--
 A C G T A C G T A C G T C G T A C T A G A C G T A G T C C G T A A C G T A C T G A T G C G T C A C G A T A C G T C G A T C T G A
T G C A A C G T A C T G C G T A T A C G C G A T A G T C C G T A A G C T G A T C G A C T G A T C G A T C G A C T A C G T A C G T

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:10
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--AGTCATGCATTTD
SCAGYCADGCATGAC
 A C G T A C G T C G T A C T A G A C G T A G T C C G T A A C G T A C T G A T G C G T C A C G A T A C G T C G A T C T G A
A T C G G T A C C G T A A T C G A G C T A T G C C G T A C T A G A T C G A G T C T C G A C A G T T C A G T C G A T G A C