Information for 5-ADAMACMCAAATATTT (Motif 3)

C G T A C T A G G C T A G T A C G C T A G T A C G T A C G T A C G C T A G C T A C G T A C G A T G C T A G C A T C G A T G C A T
Reverse Opposite:
C G T A G C T A C G T A C G A T G C T A G C A T C G A T C G A T C A T G C A T G C A T G C G A T C A T G C G A T G A T C G C A T
p-value:1e-16
log p-value:-3.723e+01
Information Content per bp:1.354
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.90%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets67.6 +/- 17.9bp
Average Position of motif in Background60.4 +/- 4.5bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0121.1_Foxj3_2/Jaspar

Match Rank:1
Score:0.60
Offset:1
Orientation:forward strand
Alignment:ADAMACMCAAATATTT--
-AACACCAAAACAAAGGA
 C G T A C T A G G C T A G T A C G C T A G T A C G T A C G T A C G C T A G C T A C G T A C G A T G C T A G C A T C G A T G C A T A C G T A C G T
A C G T G T C A C G T A A G T C C T G A G A T C G A T C T G C A G C T A G T C A C G T A A G T C C G T A C G T A G C T A C A T G T A C G C G T A

Arid5a/MA0602.1/Jaspar

Match Rank:2
Score:0.59
Offset:7
Orientation:forward strand
Alignment:ADAMACMCAAATATTT-----
-------CTAATATTGCTAAA
 C G T A C T A G G C T A G T A C G C T A G T A C G T A C G T A C G C T A G C T A C G T A C G A T G C T A G C A T C G A T G C A T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A

PB0002.1_Arid5a_1/Jaspar

Match Rank:3
Score:0.59
Offset:7
Orientation:forward strand
Alignment:ADAMACMCAAATATTT-----
-------CTAATATTGCTAAA
 C G T A C T A G G C T A G T A C G C T A G T A C G T A C G T A C G C T A G C T A C G T A C G A T G C T A G C A T C G A T G C A T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A

Foxd3/MA0041.1/Jaspar

Match Rank:4
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:ADAMACMCAAATATTT
----AAACAAACATTC
 C G T A C T A G G C T A G T A C G C T A G T A C G T A C G T A C G C T A G C T A C G T A C G A T G C T A G C A T C G A T G C A T
A C G T A C G T A C G T A C G T C T G A T G C A C T G A G A T C G T C A C G T A C G T A G A T C C T G A C G A T C G A T G A T C

PH0108.1_Msx3/Jaspar

Match Rank:5
Score:0.58
Offset:1
Orientation:forward strand
Alignment:ADAMACMCAAATATTT-
-CAAAACCAATTAATTT
 C G T A C T A G G C T A G T A C G C T A G T A C G T A C G T A C G C T A G C T A C G T A C G A T G C T A G C A T C G A T G C A T A C G T
A C G T T G A C T C G A G T C A C T G A T C G A A T G C A G T C C T G A G T C A C G A T G A C T C G T A C T G A A C G T G A C T G C A T

PH0005.1_Barhl1/Jaspar

Match Rank:6
Score:0.58
Offset:1
Orientation:forward strand
Alignment:ADAMACMCAAATATTT-
-AACAACCAATTAATTC
 C G T A C T A G G C T A G T A C G C T A G T A C G T A C G T A C G C T A G C T A C G T A C G A T G C T A G C A T C G A T G C A T A C G T
A C G T G T C A C T G A G T A C T C G A C T G A A T G C G A T C C T G A G C T A A C G T G A C T C G T A C T G A A C G T C G A T G A T C

MF0010.1_Homeobox_class/Jaspar

Match Rank:7
Score:0.56
Offset:8
Orientation:reverse strand
Alignment:ADAMACMCAAATATTT
--------AATTATT-
 C G T A C T A G G C T A G T A C G C T A G T A C G T A C G T A C G C T A G C T A C G T A C G A T G C T A G C A T C G A T G C A T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A G C T A G A C T G A C T C G T A G C A T C G A T A C G T

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.55
Offset:2
Orientation:forward strand
Alignment:ADAMACMCAAATATTT
--ATATGCAAAT----
 C G T A C T A G G C T A G T A C G C T A G T A C G T A C G T A C G C T A G C T A C G T A C G A T G C T A G C A T C G A T G C A T
A C G T A C G T G T C A G C A T G C T A C A G T C T A G G A T C C G T A C T G A C G T A C G A T A C G T A C G T A C G T A C G T

PH0006.1_Barhl2/Jaspar

Match Rank:9
Score:0.55
Offset:1
Orientation:forward strand
Alignment:ADAMACMCAAATATTT-
-AAAAACCAATTAAGAA
 C G T A C T A G G C T A G T A C G C T A G T A C G T A C G T A C G C T A G C T A C G T A C G A T G C T A G C A T C G A T G C A T A C G T
A C G T G T C A G T C A G T C A C T G A T C G A G A T C A G T C C T G A G C T A A C G T A C G T C G T A C T G A A T C G G C T A G C T A

POU2F2/MA0507.1/Jaspar

Match Rank:10
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:ADAMACMCAAATATTT
--ATATGCAAATNNN-
 C G T A C T A G G C T A G T A C G C T A G T A C G T A C G T A C G C T A G C T A C G T A C G A T G C T A G C A T C G A T G C A T
A C G T A C G T C G T A G A C T C T G A A C G T C T A G G A T C C G T A C G T A C G T A C G A T C A T G G T C A C T G A A C G T