p-value: | 1e-6 |
log p-value: | -1.430e+01 |
Information Content per bp: | 1.887 |
Number of Target Sequences with motif | 7.0 |
Percentage of Target Sequences with motif | 0.90% |
Number of Background Sequences with motif | 29.0 |
Percentage of Background Sequences with motif | 0.06% |
Average Position of motif in Targets | 52.4 +/- 26.5bp |
Average Position of motif in Background | 42.1 +/- 24.7bp |
Strand Bias (log2 ratio + to - strand density) | 1.3 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
TBP/MA0108.2/Jaspar
Match Rank: | 1 |
Score: | 0.67 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | CGTATATMMA------ -GTATAAAAGGCGGGG |
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POL012.1_TATA-Box/Jaspar
Match Rank: | 2 |
Score: | 0.67 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | CGTATATMMA------ -GTATAAAAGGCGGGG |
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Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer
Match Rank: | 3 |
Score: | 0.66 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | CGTATATMMA- -GHATATKCAT |
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PB0163.1_Six6_2/Jaspar
Match Rank: | 4 |
Score: | 0.66 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---CGTATATMMA---- ANNNGGATATATCCNNN |
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PB0106.1_Arid5a_2/Jaspar
Match Rank: | 5 |
Score: | 0.64 |
Offset: | -6 |
Orientation: | reverse strand |
Alignment: | ------CGTATATMMA- TNNTTTCGTATTNNANN |
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PB0198.1_Zfp128_2/Jaspar
Match Rank: | 6 |
Score: | 0.63 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | CGTATATMMA---- TGTATATATATACC |
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PB0080.1_Tbp_1/Jaspar
Match Rank: | 7 |
Score: | 0.62 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --CGTATATMMA---- TCTTTATATATAAATA |
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PB0186.1_Tcf3_2/Jaspar
Match Rank: | 8 |
Score: | 0.60 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---CGTATATMMA-- AGCCGAAAAAAAAAT |
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PH0067.1_Hoxc12/Jaspar
Match Rank: | 9 |
Score: | 0.59 |
Offset: | -6 |
Orientation: | forward strand |
Alignment: | ------CGTATATMMA- TTAGGTCGTAAAATTTC |
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HOXD12/MA0873.1/Jaspar
Match Rank: | 10 |
Score: | 0.59 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---CGTATATMMA AGTCGTAAAAA-- |
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