Information for 4-RGGCAGCCAGGCACCC (Motif 7)

C T G A C T A G A C T G A T G C G T C A C A T G T G A C G T A C C G T A A T C G A C T G A G T C T G C A A G T C G A T C A G T C
Reverse Opposite:
C T A G C T A G A C T G A C G T A C T G G T A C A T G C G C A T A C T G A C T G G A T C A C G T A T C G A G T C A G T C A G C T
p-value:1e-13
log p-value:-3.095e+01
Information Content per bp:1.734
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.74%
Number of Background Sequences with motif0.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets58.5 +/- 17.9bp
Average Position of motif in Background33.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

KLF16/MA0741.1/Jaspar

Match Rank:1
Score:0.59
Offset:5
Orientation:forward strand
Alignment:RGGCAGCCAGGCACCC
-----GCCACGCCCCC
 C T G A C T A G A C T G A T G C G T C A C A T G T G A C G T A C C G T A A T C G A C T G A G T C T G C A A G T C G A T C A G T C
A C G T A C G T A C G T A C G T A C G T T C A G G T A C G T A C T G C A G T A C C T A G G T A C T A G C G A T C G T A C G A T C

KLF14/MA0740.1/Jaspar

Match Rank:2
Score:0.55
Offset:4
Orientation:forward strand
Alignment:RGGCAGCCAGGCACCC--
----GGCCACGCCCCCTT
 C T G A C T A G A C T G A T G C G T C A C A T G T G A C G T A C C G T A A T C G A C T G A G T C T G C A A G T C G A T C A G T C A C G T A C G T
A C G T A C G T A C G T A C G T C A T G T C A G G T A C A G T C T G C A G A T C T C A G A T G C A G T C A G T C G T A C G A T C G A C T G A C T

SP8/MA0747.1/Jaspar

Match Rank:3
Score:0.55
Offset:5
Orientation:forward strand
Alignment:RGGCAGCCAGGCACCC-
-----GCCACGCCCACT
 C T G A C T A G A C T G A T G C G T C A C A T G T G A C G T A C C G T A A T C G A C T G A G T C T G C A A G T C G A T C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T T C A G G T A C G T A C G T C A G T A C A C T G T A G C T A G C A G T C T G C A A G T C G A C T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:4
Score:0.54
Offset:3
Orientation:forward strand
Alignment:RGGCAGCCAGGCACCC
---CTGTCTGTCACCT
 C T G A C T A G A C T G A T G C G T C A C A T G T G A C G T A C C G T A A T C G A C T G A G T C T G C A A G T C G A T C A G T C
A C G T A C G T A C G T T A G C G C A T T C A G A C G T A G T C A C G T T A C G C A G T A T G C G C T A T A G C G A T C G A C T

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:5
Score:0.54
Offset:8
Orientation:reverse strand
Alignment:RGGCAGCCAGGCACCC
--------TGACACCT
 C T G A C T A G A C T G A T G C G T C A C A T G T G A C G T A C C G T A A T C G A C T G A G T C T G C A A G T C G A T C A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T T C A G C T G A A G T C C T G A T A G C G A T C G A C T

SP3/MA0746.1/Jaspar

Match Rank:6
Score:0.54
Offset:5
Orientation:forward strand
Alignment:RGGCAGCCAGGCACCC
-----GCCACGCCCCC
 C T G A C T A G A C T G A T G C G T C A C A T G T G A C G T A C C G T A A T C G A C T G A G T C T G C A A G T C G A T C A G T C
A C G T A C G T A C G T A C G T A C G T T A C G G T A C G T A C T G C A G A T C C T A G G T A C G T A C A G T C G T A C G A T C

SP4/MA0685.1/Jaspar

Match Rank:7
Score:0.54
Offset:2
Orientation:forward strand
Alignment:RGGCAGCCAGGCACCC---
--TAAGCCACGCCCCCTTT
 C T G A C T A G A C T G A T G C G T C A C A T G T G A C G T A C C G T A A T C G A C T G A G T C T G C A A G T C G A T C A G T C A C G T A C G T A C G T
A C G T A C G T A G C T G C T A C T G A C T A G G T A C A G T C T G C A G T A C A C T G T A G C T G A C A G T C G T A C G A T C G C A T G A C T G A C T

Klf9(Zf)/GBM-Klf9-ChIP-Seq(GSE62211)/Homer

Match Rank:8
Score:0.53
Offset:5
Orientation:forward strand
Alignment:RGGCAGCCAGGCACCC-
-----GCCACRCCCACY
 C T G A C T A G A C T G A T G C G T C A C A T G T G A C G T A C C G T A A T C G A C T G A G T C T G C A A G T C G A T C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T T C A G T G A C G T A C T G C A G T A C C T A G G T A C A T G C A G T C G T C A A G T C G A C T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:RGGCAGCCAGGCACCC
----TGTCTGDCACCT
 C T G A C T A G A C T G A T G C G T C A C A T G T G A C G T A C C G T A A T C G A C T G A G T C T G C A A G T C G A T C A G T C
A C G T A C G T A C G T A C G T G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:10
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-RGGCAGCCAGGCACCC
CTGGCAGNCTGCCA---
 A C G T C T G A C T A G A C T G A T G C G T C A C A T G T G A C G T A C C G T A A T C G A C T G A G T C T G C A A G T C G A T C A G T C
A G T C C G A T A C T G A T C G T G A C G C T A C A T G A T C G T G A C C G A T A C T G T A G C G T A C G T C A A C G T A C G T A C G T