Information for 2-GTTGTGAGGCCAA (Motif 4)

A C T G C G A T A C G T A T C G A C G T A C T G C G T A A C T G C A T G A T G C A G T C C G T A C G T A
Reverse Opposite:
A C G T A C G T A C T G A T C G G A T C A G T C A C G T A G T C C G T A A T G C C G T A C G T A A G T C
p-value:1e-12
log p-value:-2.858e+01
Information Content per bp:1.937
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.96%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets30.2 +/- 16.4bp
Average Position of motif in Background30.7 +/- 13.6bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:1
Score:0.62
Offset:4
Orientation:forward strand
Alignment:GTTGTGAGGCCAA
----TRAGGTCA-
 A C T G C G A T A C G T A T C G A C G T A C T G C G T A A C T G C A T G A T G C A G T C C G T A C G T A
A C G T A C G T A C G T A C G T G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T

CREB1/MA0018.2/Jaspar

Match Rank:2
Score:0.58
Offset:4
Orientation:forward strand
Alignment:GTTGTGAGGCCAA
----TGACGTCA-
 A C T G C G A T A C G T A T C G A C G T A C T G C G T A A C T G C A T G A T G C A G T C C G T A C G T A
A C G T A C G T A C G T A C G T A C G T A T C G C G T A A T G C C T A G A G C T G T A C C G T A A C G T

PB0120.1_Foxj1_2/Jaspar

Match Rank:3
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----GTTGTGAGGCCAA
GTNTTGTTGTGANNT---
 A C G T A C G T A C G T A C G T A C G T A C T G C G A T A C G T A T C G A C G T A C T G C G T A A C T G C A T G A T G C A G T C C G T A C G T A
C A T G A G C T T A C G G A C T G C A T A C T G A C G T G A C T C T A G A G C T A C T G T G C A A G T C T C G A C G A T A C G T A C G T A C G T

TBX15/MA0803.1/Jaspar

Match Rank:4
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GTTGTGAGGCCAA
AGGTGTGA------
 A C G T A C T G C G A T A C G T A T C G A C G T A C T G C G T A A C T G C A T G A T G C A G T C C G T A C G T A
C T G A C T A G T C A G A C G T A T C G A G C T A C T G C T G A A C G T A C G T A C G T A C G T A C G T A C G T

MGA/MA0801.1/Jaspar

Match Rank:5
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GTTGTGAGGCCAA
AGGTGTGA------
 A C G T A C T G C G A T A C G T A T C G A C G T A C T G C G T A A C T G C A T G A T G C A G T C C G T A C G T A
C T G A T C A G A T C G A G C T C T A G G A C T A C T G C T G A A C G T A C G T A C G T A C G T A C G T A C G T

TBX1/MA0805.1/Jaspar

Match Rank:6
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GTTGTGAGGCCAA
AGGTGTGA------
 A C G T A C T G C G A T A C G T A T C G A C G T A C T G C G T A A C T G C A T G A T G C A G T C C G T A C G T A
C T G A T C A G A C T G A G C T A T C G G A C T A C T G T G C A A C G T A C G T A C G T A C G T A C G T A C G T

TBX20/MA0689.1/Jaspar

Match Rank:7
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--GTTGTGAGGCCAA
TAGGTGTGAAG----
 A C G T A C G T A C T G C G A T A C G T A T C G A C G T A C T G C G T A A C T G C A T G A T G C A G T C C G T A C G T A
C G A T C T G A T C A G A C T G A C G T A C T G C A G T C A T G C G T A C G T A T C A G A C G T A C G T A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:8
Score:0.56
Offset:7
Orientation:reverse strand
Alignment:GTTGTGAGGCCAA
-------TGCCAA
 A C T G C G A T A C G T A T C G A C G T A C T G C G T A A C T G C A T G A T G C A G T C C G T A C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A

ZNF692(Zf)/HEK293-ZNF692.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.56
Offset:3
Orientation:forward strand
Alignment:GTTGTGAGGCCAA
---GTGGGCCCCA
 A C T G C G A T A C G T A T C G A C G T A C T G C G T A A C T G C A T G A T G C A G T C C G T A C G T A
A C G T A C G T A C G T T A C G G A C T A C T G A C T G C T A G A T G C A G T C A G T C A G T C C T G A

X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:10
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-GTTGTGAGGCCAA
GGTTGCCATGGCAA
 A C G T A C T G C G A T A C G T A T C G A C G T A C T G C G T A A C T G C A T G A T G C A G T C C G T A C G T A
C A T G C T A G A G C T G A C T C A T G A G T C G A T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A