Information for 16-TAAGTTCTCATATAAA (Motif 25)

G A C T C G T A G T C A A T C G C G A T A C G T G A T C C G A T T A G C G T C A A C G T C T G A C G A T C G T A G T C A C G T A
Reverse Opposite:
A C G T A C G T C G A T C G T A A G C T C G T A A C G T A T C G C G T A C A T G T C G A C G T A T A G C A C G T G C A T C T G A
p-value:1e-8
log p-value:-2.065e+01
Information Content per bp:1.691
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.27%
Number of Background Sequences with motif23.5
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets44.8 +/- 22.5bp
Average Position of motif in Background34.9 +/- 26.7bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0068.1_Hoxc13/Jaspar

Match Rank:1
Score:0.60
Offset:2
Orientation:forward strand
Alignment:TAAGTTCTCATATAAA--
--AAAGCTCGTAAAATTT
 G A C T C G T A G T C A A T C G C G A T A C G T G A T C C G A T T A G C G T C A A C G T C T G A C G A T C G T A G T C A C G T A A C G T A C G T
A C G T A C G T G C A T G C T A C G T A A C T G T A G C A G C T G A T C C T A G A G C T C G T A C G T A C G T A G C T A G C A T A G C T C G A T

PH0048.1_Hoxa13/Jaspar

Match Rank:2
Score:0.57
Offset:2
Orientation:forward strand
Alignment:TAAGTTCTCATATAAA--
--AAACCTCGTAAAATTT
 G A C T C G T A G T C A A T C G C G A T A C G T G A T C C G A T T A G C G T C A A C G T C T G A C G A T C G T A G T C A C G T A A C G T A C G T
A C G T A C G T G C T A C G T A G C T A A T C G T A G C A G C T G A T C C T A G A G C T C G T A C G T A G C T A G C T A G C A T A C G T C G A T

HOXC13/MA0907.1/Jaspar

Match Rank:3
Score:0.57
Offset:5
Orientation:forward strand
Alignment:TAAGTTCTCATATAAA
-----GCTCGTAAAAA
 G A C T C G T A G T C A A T C G C G A T A C G T G A T C C G A T T A G C G T C A A C G T C T G A C G A T C G T A G T C A C G T A
A C G T A C G T A C G T A C G T A C G T A C T G T A G C A G C T G A T C C T A G A C G T C G T A G C T A C G T A G C T A G C T A

POL012.1_TATA-Box/Jaspar

Match Rank:4
Score:0.56
Offset:9
Orientation:forward strand
Alignment:TAAGTTCTCATATAAA--------
---------GTATAAAAGGCGGGG
 G A C T C G T A G T C A A T C G C G A T A C G T G A T C C G A T T A G C G T C A A C G T C T G A C G A T C G T A G T C A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G A G C T C G T A G A C T C G T A C G T A C T G A C G T A T C A G T A C G T A G C T A C G T A C G A T C G T A C G

HOXD13/MA0909.1/Jaspar

Match Rank:5
Score:0.56
Offset:6
Orientation:forward strand
Alignment:TAAGTTCTCATATAAA
------CCAATAAAAA
 G A C T C G T A G T C A A T C G C G A T A C G T G A T C C G A T T A G C G T C A A C G T C T G A C G A T C G T A G T C A C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A T C G T C A C G T A A G C T C G T A G C T A G T C A G T C A G T C A

STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer

Match Rank:6
Score:0.56
Offset:2
Orientation:forward strand
Alignment:TAAGTTCTCATATAAA
--NTTTCTNAGAAA--
 G A C T C G T A G T C A A T C G C G A T A C G T G A T C C G A T T A G C G T C A A C G T C T G A C G A T C G T A G T C A C G T A
A C G T A C G T C T G A A C G T A C G T A C G T A G T C G A C T C G A T C T G A A C T G C G T A C G T A T C G A A C G T A C G T

TBP/MA0108.2/Jaspar

Match Rank:7
Score:0.56
Offset:9
Orientation:forward strand
Alignment:TAAGTTCTCATATAAA--------
---------GTATAAAAGGCGGGG
 G A C T C G T A G T C A A T C G C G A T A C G T G A T C C G A T T A G C G T C A A C G T C T G A C G A T C G T A G T C A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G A G C T C G T A G A C T C G T A C G T A C T G A C G T A T C A G T A C G T A G C T A C G T A C G A T C G T A C G

HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer

Match Rank:8
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:TAAGTTCTCATATAAA
-----CCYMATAAAA-
 G A C T C G T A G T C A A T C G C G A T A C G T G A T C C G A T T A G C G T C A A C G T C T G A C G A T C G T A G T C A C G T A
A C G T A C G T A C G T A C G T A C G T T G A C A T G C A G T C G T C A C T G A A C G T C G T A C G T A C G T A G C T A A C G T

HOXA13/MA0650.1/Jaspar

Match Rank:9
Score:0.55
Offset:6
Orientation:forward strand
Alignment:TAAGTTCTCATATAAA
------CCAATAAAAA
 G A C T C G T A G T C A A T C G C G A T A C G T G A T C C G A T T A G C G T C A A C G T C T G A C G A T C G T A G T C A C G T A
A C G T A C G T A C G T A C G T A C G T A C G T T A G C A G T C G T C A C G T A A C G T G C T A C G T A G T C A T G C A G T C A

HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer

Match Rank:10
Score:0.55
Offset:5
Orientation:forward strand
Alignment:TAAGTTCTCATATAAA
-----NCYAATAAAA-
 G A C T C G T A G T C A A T C G C G A T A C G T G A T C C G A T T A G C G T C A A C G T C T G A C G A T C G T A G T C A C G T A
A C G T A C G T A C G T A C G T A C G T C G A T T A G C G A C T G T C A C G T A A C G T C G T A C G T A C G T A G C T A A C G T