Information for 11-AYKCACTCTGCTG (Motif 24)

C G T A A G T C A C T G A G T C T C G A A G T C A C G T A G T C A C G T A C T G A G T C A C G T A C T G
Reverse Opposite:
A G T C C G T A A C T G A G T C C G T A A C T G C G T A A C T G A G C T A C T G T G A C C T A G A C G T
p-value:1e-9
log p-value:-2.111e+01
Information Content per bp:1.917
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.80%
Number of Background Sequences with motif3.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets58.2 +/- 36.2bp
Average Position of motif in Background66.8 +/- 12.9bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:1
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:AYKCACTCTGCTG--
---CCCCCTGCTGTG
 C G T A A G T C A C T G A G T C T C G A A G T C A C G T A G T C A C G T A C T G A G T C A C G T A C T G A C G T A C G T
A C G T A C G T A C G T G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:2
Score:0.58
Offset:1
Orientation:forward strand
Alignment:AYKCACTCTGCTG---
-GGCCYCCTGCTGDGH
 C G T A A G T C A C T G A G T C T C G A A G T C A C G T A G T C A C G T A C T G A G T C A C G T A C T G A C G T A C G T A C G T
A C G T C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----AYKCACTCTGCTG--
CNNBRGCGCCCCCTGSTGGC
 A C G T A C G T A C G T A C G T A C G T C G T A A G T C A C T G A G T C T C G A A G T C A C G T A G T C A C G T A C T G A G T C A C G T A C T G A C G T A C G T
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

NRL/MA0842.1/Jaspar

Match Rank:4
Score:0.58
Offset:4
Orientation:forward strand
Alignment:AYKCACTCTGCTG--
----AATTTGCTGAC
 C G T A A G T C A C T G A G T C T C G A A G T C A C G T A G T C A C G T A C T G A G T C A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T C G T A C G T A G C A T G C A T G A C T T C A G G T A C G C A T C A T G G C T A A G T C

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:5
Score:0.57
Offset:4
Orientation:forward strand
Alignment:AYKCACTCTGCTG-
----NAHCAGCTGD
 C G T A A G T C A C T G A G T C T C G A A G T C A C G T A G T C A C G T A C T G A G T C A C G T A C T G A C G T
A C G T A C G T A C G T A C G T G T C A T G C A G C T A A G T C C G T A A C T G T G A C G C A T T C A G C A G T

CTCF/MA0139.1/Jaspar

Match Rank:6
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--AYKCACTCTGCTG----
TAGCGCCCCCTGGTGGCCA
 A C G T A C G T C G T A A G T C A C T G A G T C T C G A A G T C A C G T A G T C A C G T A C T G A G T C A C G T A C T G A C G T A C G T A C G T A C G T
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:7
Score:0.56
Offset:7
Orientation:reverse strand
Alignment:AYKCACTCTGCTG--
-------CAGCTGNT
 C G T A A G T C A C T G A G T C T C G A A G T C A C G T A G T C A C G T A C T G A G T C A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T A C C G T A A C T G T G A C C G A T A C T G A G T C G A C T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:8
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:AYKCACTCTGCTG
MRSCACTYAA---
 C G T A A G T C A C T G A G T C T C G A A G T C A C G T A G T C A C G T A C T G A G T C A C G T A C T G
G T C A C T G A T A G C A G T C C G T A G T A C G C A T A G T C C T G A T C G A A C G T A C G T A C G T

MAFK/MA0496.1/Jaspar

Match Rank:9
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:AYKCACTCTGCTG------
----AAANTGCTGACTNAG
 C G T A A G T C A C T G A G T C T C G A A G T C A C G T A G T C A C G T A C T G A G T C A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G T A C G T A C G T A G C A T C G A T A T C G G T A C A C G T A C T G C T G A A T G C G C A T G A T C C G T A C A T G

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:10
Score:0.55
Offset:8
Orientation:forward strand
Alignment:AYKCACTCTGCTG-----
--------TGCTGACTCA
 C G T A A G T C A C T G A G T C T C G A A G T C A C G T A G T C A C G T A C T G A G T C A C G T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T C T A G G A T C C A G T A C T G C T G A A T G C G C A T A T G C C T G A