Information for 6-GCTATTWATA (Motif 5)

A T C G G T A C A C G T C G T A A C G T C G A T G C A T G C T A A G C T C G T A
Reverse Opposite:
A C G T T C G A C G A T C G T A C G T A C G T A A C G T C G T A C A T G T A G C
p-value:1e-18
log p-value:-4.165e+01
Information Content per bp:1.695
Number of Target Sequences with motif79.0
Percentage of Target Sequences with motif10.55%
Number of Background Sequences with motif1558.9
Percentage of Background Sequences with motif3.34%
Average Position of motif in Targets53.4 +/- 27.2bp
Average Position of motif in Background49.7 +/- 29.7bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MEF2A/MA0052.3/Jaspar

Match Rank:1
Score:0.87
Offset:0
Orientation:reverse strand
Alignment:GCTATTWATA--
TCTATTTTTAGA
 A T C G G T A C A C G T C G T A A C G T C G A T G C A T G C T A A G C T C G T A A C G T A C G T
C A G T G A T C C A G T C T G A C G A T C G A T C G A T G C A T C G A T C T G A C A T G G T C A

MEF2B/MA0660.1/Jaspar

Match Rank:2
Score:0.87
Offset:0
Orientation:reverse strand
Alignment:GCTATTWATA--
GCTATTTATAGC
 A T C G G T A C A C G T C G T A A C G T C G A T G C A T G C T A A G C T C G T A A C G T A C G T
C A T G A G T C C A G T C G T A C G A T C G A T G C A T C G T A C G A T C T G A C A T G G A T C

MEF2D/MA0773.1/Jaspar

Match Rank:3
Score:0.86
Offset:0
Orientation:reverse strand
Alignment:GCTATTWATA--
TCTATTTATAGN
 A T C G G T A C A C G T C G T A A C G T C G A T G C A T G C T A A G C T C G T A A C G T A C G T
C A G T A G T C A G C T C G T A C G A T G C A T C G A T G C T A C A G T C T G A C T A G G A C T

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:4
Score:0.84
Offset:0
Orientation:forward strand
Alignment:GCTATTWATA--
GCTATTTTTAGC
 A T C G G T A C A C G T C G T A A C G T C G A T G C A T G C T A A G C T C G T A A C G T A C G T
C A T G A G T C A G C T C G T A C G A T C G A T G C A T G C A T C G A T C T G A C A T G T G A C

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.84
Offset:0
Orientation:reverse strand
Alignment:GCTATTWATA--
KCTATTTTTRGH
 A T C G G T A C A C G T C G T A A C G T C G A T G C A T G C T A A G C T C G T A A C G T A C G T
C A T G A G T C G A C T C G T A C G A T G C A T G C A T G C A T C G A T C T G A C A T G G T A C

MEF2C/MA0497.1/Jaspar

Match Rank:6
Score:0.79
Offset:-1
Orientation:reverse strand
Alignment:-GCTATTWATA----
TTCTATTTTTAGNNN
 A C G T A T C G G T A C A C G T C G T A A C G T C G A T G C A T G C T A A G C T C G T A A C G T A C G T A C G T A C G T
C G A T C A G T A G T C A G C T C T G A G C A T G C A T G A C T G A C T C G A T C T G A C A T G G T A C G C T A G A C T

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:7
Score:0.79
Offset:1
Orientation:reverse strand
Alignment:GCTATTWATA-
-CTATTTTTGG
 A T C G G T A C A C G T C G T A A C G T C G A T G C A T G C T A A G C T C G T A A C G T
A C G T A T G C A G C T G T C A C G A T C G A T A G C T G A C T G C A T C T G A C A T G

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:8
Score:0.79
Offset:0
Orientation:forward strand
Alignment:GCTATTWATA--
GCTATTTTTGGM
 A T C G G T A C A C G T C G T A A C G T C G A T G C A T G C T A A G C T C G T A A C G T A C G T
C A T G A G T C G A C T C G T A C G A T G C A T G A C T G C A T C G A T C T A G C A T G T G A C

PB0129.1_Glis2_2/Jaspar

Match Rank:9
Score:0.72
Offset:0
Orientation:forward strand
Alignment:GCTATTWATA----
AATATTAATAAAGA
 A T C G G T A C A C G T C G T A A C G T C G A T G C A T G C T A A G C T C G T A A C G T A C G T A C G T A C G T
G C T A C G T A A C G T C T G A C G A T C A G T C T G A G C T A G C A T G C T A C G T A G T C A C T A G T C G A

PB0080.1_Tbp_1/Jaspar

Match Rank:10
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--GCTATTWATA----
NANTTATATATAANGN
 A C G T A C G T A T C G G T A C A C G T C G T A A C G T C G A T G C A T G C T A A G C T C G T A A C G T A C G T A C G T A C G T
A G C T G T C A C A G T C G A T G C A T C G T A G C A T C G T A C G A T C G T A C G A T C G T A G C T A C G T A C T A G C T G A