Information for 19-TTCCTTAATATGGACA (Motif 26)

A C G T A G C T A G T C G T A C C G A T A C G T C G T A C G T A C G A T G T C A A C G T C T A G A C T G C G T A A G T C C G T A
Reverse Opposite:
A C G T A C T G A C G T A G T C A G T C C G T A A C G T C G T A A C G T A C G T C G T A C G T A A C T G C T A G C T G A C G T A
p-value:1e-8
log p-value:-1.973e+01
Information Content per bp:1.914
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.53%
Number of Background Sequences with motif0.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets67.2 +/- 12.1bp
Average Position of motif in Background19.0 +/- 0.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SRF/MA0083.3/Jaspar

Match Rank:1
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TTCCTTAATATGGACA
TGNCCATATATGGTCA
 A C G T A G C T A G T C G T A C C G A T A C G T C G T A C G T A C G A T G T C A A C G T C T A G A C T G C G T A A G T C C G T A
G C A T A C T G G T C A G A T C A T G C C G T A C G A T T G C A A G C T G C T A G C A T T C A G A T C G C A G T T G A C C G T A

PB0129.1_Glis2_2/Jaspar

Match Rank:2
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--TTCCTTAATATGGACA
TCTTTANTAATANN----
 A C G T A C G T A C G T A G C T A G T C G T A C C G A T A C G T C G T A C G T A C G A T G T C A A C G T C T A G A C T G C G T A A G T C C G T A
A G C T A G T C C A G T G C A T C G A T C G T A C G A T G A C T G T C A C G T A G A C T T G C A G C A T C G A T A C G T A C G T A C G T A C G T

Arid3b/MA0601.1/Jaspar

Match Rank:3
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:TTCCTTAATATGGACA
NTAATTAATAT-----
 A C G T A G C T A G T C G T A C C G A T A C G T C G T A C G T A C G A T G T C A A C G T C T A G A C T G C G T A A G T C C G T A
A C G T A C G T C G T A C G T A C G A T A C G T C G T A C G T A C G A T C G T A A C G T A C G T A C G T A C G T A C G T A C G T

PB0162.1_Sfpi1_2/Jaspar

Match Rank:4
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--TTCCTTAATATGGACA
GGTTCCNNAATTTG----
 A C G T A C G T A C G T A G C T A G T C G T A C C G A T A C G T C G T A C G T A C G A T G T C A A C G T C T A G A C T G C G T A A G T C C G T A
C A T G A C T G C G A T G C A T A G T C A G T C A C T G C A T G G C T A C G T A C G A T G A C T C A G T C A T G A C G T A C G T A C G T A C G T

Arid5a/MA0602.1/Jaspar

Match Rank:5
Score:0.56
Offset:4
Orientation:forward strand
Alignment:TTCCTTAATATGGACA--
----CTAATATTGCTAAA
 A C G T A G C T A G T C G T A C C G A T A C G T C G T A C G T A C G A T G T C A A C G T C T A G A C T G C G T A A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A

PB0002.1_Arid5a_1/Jaspar

Match Rank:6
Score:0.56
Offset:4
Orientation:forward strand
Alignment:TTCCTTAATATGGACA--
----CTAATATTGCTAAA
 A C G T A G C T A G T C G T A C C G A T A C G T C G T A C G T A C G A T G T C A A C G T C T A G A C T G C G T A A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A

PH0150.1_Pou4f3/Jaspar

Match Rank:7
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---TTCCTTAATATGGACA
GACNTCATTAATAANN---
 A C G T A C G T A C G T A C G T A G C T A G T C G T A C C G A T A C G T C G T A C G T A C G A T G T C A A C G T C T A G A C T G C G T A A G T C C G T A
C T A G C T G A T G A C G A T C C A G T G T A C C G T A C G A T C G A T C G T A C T G A C G A T C G T A G T C A A G T C C G A T A C G T A C G T A C G T

PB0078.1_Srf_1/Jaspar

Match Rank:8
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:TTCCTTAATATGGACA
-TNCCATATATGGNA-
 A C G T A G C T A G T C G T A C C G A T A C G T C G T A C G T A C G A T G T C A A C G T C T A G A C T G C G T A A G T C C G T A
A C G T C A G T C G A T G T A C A G T C C G T A C G A T C G T A G C A T C G T A C G A T C T A G C A T G C G T A C G T A A C G T

Pou5f1::Sox2/MA0142.1/Jaspar

Match Rank:9
Score:0.54
Offset:2
Orientation:forward strand
Alignment:TTCCTTAATATGGACA-
--CTTTGTTATGCAAAT
 A C G T A G C T A G T C G T A C C G A T A C G T C G T A C G T A C G A T G T C A A C G T C T A G A C T G C G T A A G T C C G T A A C G T
A C G T A C G T A G T C G C A T A G C T C A G T T A C G C G A T G A C T G C T A C G A T A C T G A G T C C G T A C T G A C T G A C A G T

OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:TTCCTTAATATGGACA-
--CATTGTTATGCAAAT
 A C G T A G C T A G T C G T A C C G A T A C G T C G T A C G T A C G A T G T C A A C G T C T A G A C T G C G T A A G T C C G T A A C G T
A C G T A C G T G A T C G C T A G A C T C G A T A T C G C G A T G A C T C G T A C G A T C A T G A G T C C G T A C T G A C G T A C G A T