Information for 25-TYTYTYTYTC (Motif 22)

A G C T A G C T A G C T A G C T A G C T A G C T G A C T A G T C G A C T A G T C
Reverse Opposite:
T C A G C T G A T C A G C T G A T C G A T C G A T C G A T C G A T C G A T C G A
p-value:1e-21
log p-value:-4.872e+01
Information Content per bp:1.553
Number of Target Sequences with motif32.0
Percentage of Target Sequences with motif4.19%
Number of Background Sequences with motif0.4
Percentage of Background Sequences with motif0.15%
Average Position of motif in Targets43.2 +/- 26.3bp
Average Position of motif in Background13.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:1
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:TYTYTYTYTC-----
-TTTTTTTTCNNGTN
 A G C T A G C T A G C T A G C T A G C T A G C T G A C T A G T C G A C T A G T C A C G T A C G T A C G T A C G T A C G T
A C G T G A C T G C A T C A G T C G A T A G C T A G C T G C A T G C A T A G T C T G A C G T C A A C T G G A C T C G T A

PB0182.1_Srf_2/Jaspar

Match Rank:2
Score:0.70
Offset:-4
Orientation:reverse strand
Alignment:----TYTYTYTYTC---
NNNNTTTTTTTTTNAAC
 A C G T A C G T A C G T A C G T A G C T A G C T A G C T A G C T A G C T A G C T G A C T A G T C G A C T A G T C A C G T A C G T A C G T
C G A T C G T A T C G A A C G T C A G T C A G T C A G T C G A T A C G T A C G T A C G T G A C T G A C T G C A T G C T A T G C A A T G C

Sox3/MA0514.1/Jaspar

Match Rank:3
Score:0.66
Offset:0
Orientation:forward strand
Alignment:TYTYTYTYTC
CCTTTGTTTT
 A G C T A G C T A G C T A G C T A G C T A G C T G A C T A G T C G A C T A G T C
A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:4
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--TYTYTYTYTC
ACTTTCACTTTC
 A C G T A C G T A G C T A G C T A G C T A G C T A G C T A G C T G A C T A G T C G A C T A G T C
C T G A A T G C G A C T C G A T A G C T A G T C C G T A A T G C A C G T A C G T G A C T A G T C

IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer

Match Rank:5
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--TYTYTYTYTC
RSTTTCRSTTTC
 A C G T A C G T A G C T A G C T A G C T A G C T A G C T A G C T G A C T A G T C G A C T A G T C
T C G A A T G C A C G T A C G T A G C T A G T C C T G A A T G C G C A T G A C T A G C T G A T C

IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer

Match Rank:6
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--TYTYTYTYTC
AGTTTCAKTTTC
 A C G T A C G T A G C T A G C T A G C T A G C T A G C T A G C T G A C T A G T C G A C T A G T C
C T G A T A C G G C A T A G C T A G C T A G T C T C G A A C T G C A G T A G C T A G C T G A T C

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:7
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--TYTYTYTYTC
AGTTTCAGTTTC
 A C G T A C G T A G C T A G C T A G C T A G C T A G C T A G C T G A C T A G T C G A C T A G T C
C T G A A T C G A G C T A G C T A C G T T A G C C T G A T A C G C G A T A C G T G A C T A G T C

PB0186.1_Tcf3_2/Jaspar

Match Rank:8
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-TYTYTYTYTC----
NNTTTNTTTTNGNNN
 A C G T A G C T A G C T A G C T A G C T A G C T A G C T G A C T A G T C G A C T A G T C A C G T A C G T A C G T A C G T
C G T A C G A T A G C T C G A T A C G T C G A T C G A T C G A T A G C T G C A T T A G C A T C G T A C G A T G C G A C T

IRF1/MA0050.2/Jaspar

Match Rank:9
Score:0.60
Offset:-6
Orientation:forward strand
Alignment:------TYTYTYTYTC-----
TTTTACTTTCACTTTCACTTT
 A C G T A C G T A C G T A C G T A C G T A C G T A G C T A G C T A G C T A G C T A G C T A G C T G A C T A G T C G A C T A G T C A C G T A C G T A C G T A C G T A C G T
G A C T A G C T A G C T A G C T C T G A A T G C C G A T A G C T A G C T A G T C C T G A A T G C G C A T G A C T G A C T A G T C C G T A A G T C G A C T G C A T G A C T

PB0166.1_Sox12_2/Jaspar

Match Rank:10
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---TYTYTYTYTC---
ANTCCTTTGTCTNNNN
 A C G T A C G T A C G T A G C T A G C T A G C T A G C T A G C T A G C T G A C T A G T C G A C T A G T C A C G T A C G T A C G T
C G T A G C A T A C G T A G T C A T G C C G A T A G C T C G A T T C A G A C G T T A G C G A C T T C A G G C A T A C G T A C G T