Information for 20-TGCATCTGCC (Motif 19)

C G A T T C A G T G A C G T C A A C G T A G T C C G A T A C T G A G T C G A T C
Reverse Opposite:
C T A G T C A G T G A C G C T A T C A G T G C A C A G T A C T G A G T C G C T A
p-value:1e-33
log p-value:-7.731e+01
Information Content per bp:1.697
Number of Target Sequences with motif66.0
Percentage of Target Sequences with motif8.64%
Number of Background Sequences with motif3.7
Percentage of Background Sequences with motif1.51%
Average Position of motif in Targets50.1 +/- 26.0bp
Average Position of motif in Background59.3 +/- 22.9bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:1
Score:0.79
Offset:0
Orientation:reverse strand
Alignment:TGCATCTGCC--
NVCAGCTGBBNN
 C G A T T C A G T G A C G T C A A C G T A G T C C G A T A C T G A G T C G A T C A C G T A C G T
T C G A T A C G G T A C C G T A A T C G T G A C C G A T A C T G A T G C A T G C T C A G G A T C

Myog/MA0500.1/Jaspar

Match Rank:2
Score:0.77
Offset:-1
Orientation:reverse strand
Alignment:-TGCATCTGCC
NNGCAGCTGTC
 A C G T C G A T T C A G T G A C G T C A A C G T A G T C C G A T A C T G A G T C G A T C
A T G C G A C T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C

Myod1/MA0499.1/Jaspar

Match Rank:3
Score:0.77
Offset:0
Orientation:forward strand
Alignment:TGCATCTGCC---
TGCAGCTGTCCCT
 C G A T T C A G T G A C G T C A A C G T A G T C C G A T A C T G A G T C G A T C A C G T A C G T A C G T
G C A T T A C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C T A G C A G T C A G C T

Ascl2/MA0816.1/Jaspar

Match Rank:4
Score:0.76
Offset:0
Orientation:forward strand
Alignment:TGCATCTGCC
AGCAGCTGCT
 C G A T T C A G T G A C G T C A A C G T A G T C C G A T A C T G A G T C G A T C
T C G A T C A G G T A C C G T A A T C G T G A C C G A T A C T G A G T C G A C T

Tcf12/MA0521.1/Jaspar

Match Rank:5
Score:0.75
Offset:-1
Orientation:reverse strand
Alignment:-TGCATCTGCC
NNGCAGCTGTT
 A C G T C G A T T C A G T G A C G T C A A C G T A G T C C G A T A C T G A G T C G A T C
A T G C G C A T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G C T

NHLH1/MA0048.2/Jaspar

Match Rank:6
Score:0.75
Offset:0
Orientation:forward strand
Alignment:TGCATCTGCC
CGCAGCTGCG
 C G A T T C A G T G A C G T C A A C G T A G T C C G A T A C T G A G T C G A T C
T G A C T C A G G T A C T G C A A T C G T A G C A C G T T A C G G A T C A C T G

PB0003.1_Ascl2_1/Jaspar

Match Rank:7
Score:0.75
Offset:-3
Orientation:forward strand
Alignment:---TGCATCTGCC----
CTCAGCAGCTGCTACTG
 A C G T A C G T A C G T C G A T T C A G T G A C G T C A A C G T A G T C C G A T A C T G A G T C G A T C A C G T A C G T A C G T A C G T
A G T C A C G T A G T C T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T G A C G A T C G C A T C A T G

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:8
Score:0.75
Offset:-1
Orientation:forward strand
Alignment:-TGCATCTGCC-
SNGCACCTGCHS
 A C G T C G A T T C A G T G A C G T C A A C G T A G T C C G A T A C T G A G T C G A T C A C G T
T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:9
Score:0.74
Offset:-1
Orientation:forward strand
Alignment:-TGCATCTGCC
NNACAGCTGC-
 A C G T C G A T T C A G T G A C G T C A A C G T A G T C C G A T A C T G A G T C G A T C
C G T A T G A C T C G A A G T C C G T A A T C G A T G C A C G T A C T G A G T C A C G T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:10
Score:0.74
Offset:0
Orientation:forward strand
Alignment:TGCATCTGCC--
AGCAGCTGCTNN
 C G A T T C A G T G A C G T C A A C G T A G T C C G A T A C T G A G T C G A T C A C G T A C G T
C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A T C G A G T C