Information for 14-CAAAATTAGG (Motif 13)

A G T C C G T A C G T A C G T A C G T A A C G T A C G T C G T A A C T G A C T G
Reverse Opposite:
A G T C A G T C A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C T G
p-value:1e-52
log p-value:-1.214e+02
Information Content per bp:1.530
Number of Target Sequences with motif74.0
Percentage of Target Sequences with motif9.69%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif1.10%
Average Position of motif in Targets46.0 +/- 28.7bp
Average Position of motif in Background43.6 +/- 17.6bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Dlx1/MA0879.1/Jaspar

Match Rank:1
Score:0.70
Offset:0
Orientation:forward strand
Alignment:CAAAATTAGG
CCTAATTATC
 A G T C C G T A C G T A C G T A C G T A A C G T A C G T C G T A A C T G A C T G
T G A C T G A C G A C T T G C A G C T A C G A T A C G T G C T A A C G T A T G C

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:2
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--CAAAATTAGG
KCCAAAAATAGC
 A C G T A C G T A G T C C G T A C G T A C G T A C G T A A C G T A C G T C G T A A C T G A C T G
A C T G G T A C G A T C G C T A C G T A C T G A C G T A C G T A G C A T C T G A T C A G G T A C

Arid5a/MA0602.1/Jaspar

Match Rank:3
Score:0.69
Offset:-5
Orientation:reverse strand
Alignment:-----CAAAATTAGG
NNTNNCAATATTAG-
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A C G T A C G T A C G T A A C G T A C G T C G T A A C T G A C T G
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G A C G T

PB0002.1_Arid5a_1/Jaspar

Match Rank:4
Score:0.69
Offset:-5
Orientation:reverse strand
Alignment:-----CAAAATTAGG
NNTNNCAATATTAG-
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A C G T A C G T A C G T A A C G T A C G T C G T A A C T G A C T G
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G A C G T

VSX1/MA0725.1/Jaspar

Match Rank:5
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:CAAAATTAGG
-NTAATTAG-
 A G T C C G T A C G T A C G T A C G T A A C G T A C G T C G T A A C T G A C T G
A C G T T G C A G A C T G T C A C T G A A G C T C A G T C T G A C T A G A C G T

VSX2/MA0726.1/Jaspar

Match Rank:6
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:CAAAATTAGG
-NTAATTAG-
 A G T C C G T A C G T A C G T A C G T A A C G T A C G T C G T A A C T G A C T G
A C G T T G A C G A C T C G T A C T G A A C G T C G A T C T G A T C A G A C G T

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--CAAAATTAGG
DCYAAAAATAGM
 A C G T A C G T A G T C C G T A C G T A C G T A C G T A A C G T A C G T C G T A A C T G A C T G
C A T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G A C T C T G A T C A G G T A C

MEF2C/MA0497.1/Jaspar

Match Rank:8
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----CAAAATTAGG-
ATGCTAAAAATAGAA
 A C G T A C G T A C G T A C G T A G T C C G T A C G T A C G T A C G T A A C G T A C G T C G T A A C T G A C T G A C G T
C T G A C G A T C A T G G T A C A G C T G C T A C T G A C T G A C G T A C G T A G A C T C T G A T C A G G T C A G C T A

Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer

Match Rank:9
Score:0.66
Offset:2
Orientation:forward strand
Alignment:CAAAATTAGG
--TAATTAGN
 A G T C C G T A C G T A C G T A C G T A A C G T A C G T C G T A A C T G A C T G
A C G T A C G T A G C T G T C A C G T A A C G T A C G T C T G A T C A G A T G C

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:10
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-CAAAATTAGG
CCAAAAATAG-
 A C G T A G T C C G T A C G T A C G T A C G T A A C G T A C G T C G T A A C T G A C T G
G T A C G A C T C G T A C T G A T C G A C G T A G C T A C A G T C T G A T A C G A C G T