Information for 13-TCAATGTAGG (Motif 11)

C G A T T G A C G C T A T C G A C G A T C A T G A G C T C T G A C A T G T A C G
Reverse Opposite:
A T G C G T A C G A C T T C G A G T A C G C T A A G C T C G A T A C T G C G T A
p-value:1e-61
log p-value:-1.410e+02
Information Content per bp:1.663
Number of Target Sequences with motif65.0
Percentage of Target Sequences with motif8.51%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.71%
Average Position of motif in Targets56.5 +/- 24.3bp
Average Position of motif in Background65.0 +/- 10.7bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0028.1_Hbp1_1/Jaspar

Match Rank:1
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----TCAATGTAGG--
ACTATGAATGAATGAT
 A C G T A C G T A C G T A C G T C G A T T G A C G C T A T C G A C G A T C A T G A G C T C T G A C A T G T A C G A C G T A C G T
G C T A G T A C C G A T G C T A G C A T T A C G C G T A C G T A C G A T A C T G C T G A T C G A G A C T C A T G C T G A A G C T

PB0005.1_Bbx_1/Jaspar

Match Rank:2
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----TCAATGTAGG-
TAATTCAATGAAGTG
 A C G T A C G T A C G T A C G T C G A T T G A C G C T A T C G A C G A T C A T G A G C T C T G A C A T G T A C G A C G T
G C A T G C T A C T G A C G A T C G A T T G A C G C T A C G T A C G A T A C T G C G T A G C T A A T C G G C A T C T A G

PB0171.1_Sox18_2/Jaspar

Match Rank:3
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----TCAATGTAGG--
NNNNTGAATTCANNNC
 A C G T A C G T A C G T A C G T C G A T T G A C G C T A T C G A C G A T C A T G A G C T C T G A C A T G T A C G A C G T A C G T
A C T G C A T G G A T C G C T A A G C T C T A G G T C A C T G A G A C T C A G T G A T C T C G A T A C G A G C T T G A C G A T C

Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer

Match Rank:4
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----TCAATGTAGG
HNRAATCAAT-----
 A C G T A C G T A C G T A C G T A C G T C G A T T G A C G C T A T C G A C G A T C A T G A G C T C T G A C A T G T A C G
G C T A A C T G T C G A C T G A C T G A A C G T T A G C C T G A C G T A C G A T A C G T A C G T A C G T A C G T A C G T

THRa(NR)/C17.2-THRa-ChIP-Seq(GSE38347)/Homer

Match Rank:5
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--TCAATGTAGG---
GGTCANYTGAGGWCA
 A C G T A C G T C G A T T G A C G C T A T C G A C G A T C A T G A G C T C T G A C A T G T A C G A C G T A C G T A C G T
C T A G C A T G A C G T A G T C G C T A A G C T A G T C A G C T T C A G C T G A A C T G C A T G G C A T A T G C C G T A

LXRE(NR),DR4/RAW-LXRb.biotin-ChIP-Seq(GSE21512)/Homer

Match Rank:6
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---TCAATGTAGG---
GGGTTACTANAGGTCA
 A C G T A C G T A C G T C G A T T G A C G C T A T C G A C G A T C A T G A G C T C T G A C A T G T A C G A C G T A C G T A C G T
C T A G C A T G C A T G A G C T G A C T C G T A G A T C A G C T G T C A A T G C T C G A C T A G C A T G A C G T A G T C C T G A

PB0178.1_Sox8_2/Jaspar

Match Rank:7
Score:0.54
Offset:-7
Orientation:reverse strand
Alignment:-------TCAATGTAGG
NNTNTCATGAATGT---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T T G A C G C T A T C G A C G A T C A T G A G C T C T G A C A T G T A C G
A T G C T A C G C A G T A C T G C G A T G A T C T G C A A G C T C T A G C G T A T C G A C G A T C T A G G A C T A C G T A C G T A C G T

SA0002.1_at_AC_acceptor/Jaspar

Match Rank:8
Score:0.53
Offset:-8
Orientation:forward strand
Alignment:--------TCAATGTAGG--
TTTTTTTTTTTTTTCAGGTT
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T T G A C G C T A T C G A C G A T C A T G A G C T C T G A C A T G T A C G A C G T A C G T
G A C T A G C T A G C T G A C T G A C T A G C T A G C T A G C T A G C T G A C T G A C T G A C T G A C T G A C T G A T C C G T A A C T G T C A G G C A T C G A T

Nr1h3::Rxra/MA0494.1/Jaspar

Match Rank:9
Score:0.53
Offset:-6
Orientation:reverse strand
Alignment:------TCAATGTAGG---
NNGAGGTTACTNNAGGTCA
 A C G T A C G T A C G T A C G T A C G T A C G T C G A T T G A C G C T A T C G A C G A T C A T G A G C T C T G A C A T G T A C G A C G T A C G T A C G T
T G A C G T C A T C A G T C G A C A T G C A T G A G C T G A C T G C T A G A T C G A C T G A C T A G C T T C G A C T A G C A T G C A G T A G T C T C G A

PB0176.1_Sox5_2/Jaspar

Match Rank:10
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---TCAATGTAGG--
NNCTNAATTATGANN
 A C G T A C G T A C G T C G A T T G A C G C T A T C G A C G A T C A T G A G C T C T G A C A T G T A C G A C G T A C G T
G A C T G A T C A T G C A C G T G C A T C T G A C G T A C G A T A C G T G T C A G A C T T C A G G C T A C G A T G C T A