Information for 5-AACAGCATTTRCA (Motif 8)

C G T A C T G A A T G C T C G A A C T G A T G C C G T A A C G T A C G T A C G T T C A G A G T C G T C A
Reverse Opposite:
C A G T A C T G A G T C C G T A C G T A C G T A C G A T A T C G A G T C A C G T A T C G A G C T A C G T
p-value:1e-14
log p-value:-3.227e+01
Information Content per bp:1.818
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.01%
Number of Background Sequences with motif4.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets44.9 +/- 23.8bp
Average Position of motif in Background35.7 +/- 31.5bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tcf21/MA0832.1/Jaspar

Match Rank:1
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--AACAGCATTTRCA
NCAACAGCTGTTGC-
 A C G T A C G T C G T A C T G A A T G C T C G A A C T G A T G C C G T A A C G T A C G T A C G T T C A G A G T C G T C A
T C G A A G T C C T G A T G C A A G T C C G T A T A C G G T A C A C G T A C T G A C G T G A C T C T A G A G T C A C G T

POU2F2/MA0507.1/Jaspar

Match Rank:2
Score:0.63
Offset:3
Orientation:forward strand
Alignment:AACAGCATTTRCA---
---TTCATTTGCATAT
 C G T A C T G A A T G C T C G A A C T G A T G C C G T A A C G T A C G T A C G T T C A G A G T C G T C A A C G T A C G T A C G T
A C G T A C G T A C G T G A C T C A G T G T A C G C T A A C G T G C A T A C G T C T A G A G T C G T C A A G C T C T G A G C A T

MSC/MA0665.1/Jaspar

Match Rank:3
Score:0.62
Offset:0
Orientation:forward strand
Alignment:AACAGCATTTRCA
AACAGCTGTT---
 C G T A C T G A A T G C T C G A A C T G A T G C C G T A A C G T A C G T A C G T T C A G A G T C G T C A
C T G A T G C A A T G C C G T A A T C G A T G C A C G T A C T G A G C T A G C T A C G T A C G T A C G T

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.61
Offset:6
Orientation:forward strand
Alignment:AACAGCATTTRCA---
------ATTTGCATAA
 C G T A C T G A A T G C T C G A A C T G A T G C C G T A A C G T A C G T A C G T T C A G A G T C G T C A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A G C T C G A T C T A G G T A C C G T A A G C T C G T A G C T A

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:5
Score:0.61
Offset:6
Orientation:reverse strand
Alignment:AACAGCATTTRCA---
------ATTTGCATAT
 C G T A C T G A A T G C T C G A A C T G A T G C C G T A A C G T A C G T A C G T T C A G A G T C G T C A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C T A C G A T G A C T A C G T C T A G G A T C G T C A C G A T C G T A C A G T

POU5F1B/MA0792.1/Jaspar

Match Rank:6
Score:0.59
Offset:6
Orientation:reverse strand
Alignment:AACAGCATTTRCA--
------ATTTGCATA
 C G T A C T G A A T G C T C G A A C T G A T G C C G T A A C G T A C G T A C G T T C A G A G T C G T C A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C T A G C A T G C A T G C A T T C A G G T A C T C G A G C A T C T G A

MYF6/MA0667.1/Jaspar

Match Rank:7
Score:0.58
Offset:0
Orientation:forward strand
Alignment:AACAGCATTTRCA
AACAGCTGTT---
 C G T A C T G A A T G C T C G A A C T G A T G C C G T A A C G T A C G T A C G T T C A G A G T C G T C A
T C G A T C G A A G T C T C G A T C A G A G T C C G A T A T C G G A C T A G C T A C G T A C G T A C G T

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:8
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:AACAGCATTTRCA--
---BTVATTWGCATA
 C G T A C T G A A T G C T C G A A C T G A T G C C G T A A C G T A C G T A C G T T C A G A G T C G T C A A C G T A C G T
A C G T A C G T A C G T A G T C C A G T T G C A G T C A A C G T A G C T C G A T T C A G G T A C C G T A A C G T C T G A

POU3F4/MA0789.1/Jaspar

Match Rank:9
Score:0.57
Offset:6
Orientation:reverse strand
Alignment:AACAGCATTTRCA--
------ATTTGCATA
 C G T A C T G A A T G C T C G A A C T G A T G C C G T A A C G T A C G T A C G T T C A G A G T C G T C A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C T A G C A T C G A T G C A T T C A G G T A C C G T A G A C T C G T A

Pou2f3/MA0627.1/Jaspar

Match Rank:10
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:AACAGCATTTRCA-----
--TNTAATTTGCATACNA
 C G T A C T G A A T G C T C G A A C T G A T G C C G T A A C G T A C G T A C G T T C A G A G T C G T C A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G A T C C A G T T G C A G C T A C G A T G C A T C G A T C T A G G T A C C T G A C G A T C T G A G T A C C G T A T C G A