Information for 10-SMAAYCTATTAMT (Motif 13)

A T G C G T C A C G T A C G T A A G C T A G T C A C G T C G T A A C G T A C G T C G T A G T A C A C G T
Reverse Opposite:
C G T A A C T G A C G T C G T A C G T A C G A T C G T A A C T G T C G A A C G T A C G T C A G T A T C G
p-value:1e-11
log p-value:-2.696e+01
Information Content per bp:1.872
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.75%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets65.3 +/- 30.5bp
Average Position of motif in Background33.6 +/- 20.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0135.1_Hoxa3_2/Jaspar

Match Rank:1
Score:0.71
Offset:0
Orientation:forward strand
Alignment:SMAAYCTATTAMT-
AAAAACCATTAAGG
 A T G C G T C A C G T A C G T A A G C T A G T C A C G T C G T A A C G T A C G T C G T A G T A C A C G T A C G T
T C G A G T C A C T G A G C T A C G T A T G A C A G T C T G C A C G A T G C A T C G T A C T G A A T C G T C A G

Pax7(Paired,Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:2
Score:0.70
Offset:1
Orientation:forward strand
Alignment:SMAAYCTATTAMT
-TAATCAATTA--
 A T G C G T C A C G T A C G T A A G C T A G T C A C G T C G T A A C G T A C G T C G T A G T A C A C G T
A C G T C G A T C T G A C G T A A G C T A G T C T G C A C T G A A C G T A G C T G C T A A C G T A C G T

PH0006.1_Barhl2/Jaspar

Match Rank:3
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-SMAAYCTATTAMT--
AAAAACCAATTAAGAA
 A C G T A T G C G T C A C G T A C G T A A G C T A G T C A C G T C G T A A C G T A C G T C G T A G T A C A C G T A C G T A C G T
G T C A G T C A G T C A C T G A T C G A G A T C A G T C C T G A G C T A A C G T A C G T C G T A C T G A A T C G G C T A G C T A

PH0088.1_Isl2/Jaspar

Match Rank:4
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-SMAAYCTATTAMT--
CAAAATCAATTAATTT
 A C G T A T G C G T C A C G T A C G T A A G C T A G T C A C G T C G T A A C G T A C G T C G T A G T A C A C G T A C G T A C G T
G T A C G C T A G T C A G T C A G T C A A G C T G A T C G T C A G T C A G A C T G A C T C G T A C T G A C A G T C G A T G A C T

PAX7/MA0680.1/Jaspar

Match Rank:5
Score:0.69
Offset:1
Orientation:forward strand
Alignment:SMAAYCTATTAMT
-TAATCGATTA--
 A T G C G T C A C G T A C G T A A G C T A G T C A C G T C G T A A C G T A C G T C G T A G T A C A C G T
A C G T C G A T T G C A G T C A G A C T A G T C T C A G C G T A C G A T G A C T G C T A A C G T A C G T

PAX3/MA0780.1/Jaspar

Match Rank:6
Score:0.69
Offset:1
Orientation:forward strand
Alignment:SMAAYCTATTAMT
-TAATCGATTA--
 A T G C G T C A C G T A C G T A A G C T A G T C A C G T C G T A A C G T A C G T C G T A G T A C A C G T
A C G T C G A T T C G A G T C A A G C T A G T C T C A G C T G A A C G T G A C T G C T A A C G T A C G T

Barx1(Homeobox)/Stomach-Barx1.3xFlag-ChIP-Seq(GSE69483)/Homer

Match Rank:7
Score:0.68
Offset:2
Orientation:forward strand
Alignment:SMAAYCTATTAMT
--AAACMATTAN-
 A T G C G T C A C G T A C G T A A G C T A G T C A C G T C G T A A C G T A C G T C G T A G T A C A C G T
A C G T A C G T T C G A C T G A C T G A A T G C G T A C G T C A A G C T A G C T C G T A T C A G A C G T

PH0005.1_Barhl1/Jaspar

Match Rank:8
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-SMAAYCTATTAMT--
AACAACCAATTAATTC
 A C G T A T G C G T C A C G T A C G T A A G C T A G T C A C G T C G T A A C G T A C G T C G T A G T A C A C G T A C G T A C G T
G T C A C T G A G T A C T C G A C T G A A T G C G A T C C T G A G C T A A C G T G A C T C G T A C T G A A C G T C G A T G A T C

VENTX/MA0724.1/Jaspar

Match Rank:9
Score:0.66
Offset:3
Orientation:forward strand
Alignment:SMAAYCTATTAMT
---ACCGATTAG-
 A T G C G T C A C G T A C G T A A G C T A G T C A C G T C G T A A C G T A C G T C G T A G T A C A C G T
A C G T A C G T A C G T C G T A T G A C G A T C T C A G G T C A A C G T A C G T C G T A C T A G A C G T

Arid3b/MA0601.1/Jaspar

Match Rank:10
Score:0.65
Offset:5
Orientation:forward strand
Alignment:SMAAYCTATTAMT---
-----ATATTAATTAA
 A T G C G T C A C G T A C G T A A G C T A G T C A C G T C G T A A C G T A C G T C G T A G T A C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A C G A T G C T A C G A T A C G T C G T A C G T A C G A T G C A T C G T A C G T A