Information for 3-ARAKRKGCAC (Motif 8)

C G T A T C A G T G C A A C G T C T A G C A G T T C A G G T A C C T G A G A T C
Reverse Opposite:
C T A G G A C T C A T G A G T C G T C A A G T C T G C A A C G T A G T C A C G T
p-value:1e-11
log p-value:-2.597e+01
Information Content per bp:1.656
Number of Target Sequences with motif58.0
Percentage of Target Sequences with motif6.96%
Number of Background Sequences with motif1158.6
Percentage of Background Sequences with motif2.48%
Average Position of motif in Targets49.0 +/- 29.8bp
Average Position of motif in Background49.2 +/- 31.5bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0026.1_Gm397_1/Jaspar

Match Rank:1
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-ARAKRKGCAC------
CAGATGTGCACATACGT
 A C G T C G T A T C A G T G C A A C G T C T A G C A G T T C A G G T A C C T G A G A T C A C G T A C G T A C G T A C G T A C G T A C G T
G T A C G C T A C A T G C G T A C G A T T A C G A G C T C T A G A G T C C T G A A T G C G C T A A G C T G T C A G T A C C A T G G A C T

PB0104.1_Zscan4_1/Jaspar

Match Rank:2
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-ARAKRKGCAC------
TACATGTGCACATAAAA
 A C G T C G T A T C A G T G C A A C G T C T A G C A G T T C A G G T A C C T G A G A T C A C G T A C G T A C G T A C G T A C G T A C G T
C A G T G T C A T G A C C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A A G C T G C T A G C T A C G T A G T C A

PB0146.1_Mafk_2/Jaspar

Match Rank:3
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---ARAKRKGCAC--
GAAAAAATTGCAAGG
 A C G T A C G T A C G T C G T A T C A G T G C A A C G T C T A G C A G T T C A G G T A C C T G A G A T C A C G T A C G T
T C A G G T C A T C G A C T G A C T G A G C T A G C T A C A G T A G C T C A T G A G T C T G C A G T C A A T C G T C A G

PB0133.1_Hic1_2/Jaspar

Match Rank:4
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--ARAKRKGCAC----
NNNNTTGGGCACNNCN
 A C G T A C G T C G T A T C A G T G C A A C G T C T A G C A G T T C A G G T A C C T G A G A T C A C G T A C G T A C G T A C G T
A G T C G A T C C A G T G C A T G C A T C A G T A C T G A C T G A C T G A G T C C G T A G A T C G T C A G T A C T A G C G T A C

HIC2/MA0738.1/Jaspar

Match Rank:5
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:ARAKRKGCAC
-NGTGGGCAT
 C G T A T C A G T G C A A C G T C T A G C A G T T C A G G T A C C T G A G A T C
A C G T T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T

PH0148.1_Pou3f3/Jaspar

Match Rank:6
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-ARAKRKGCAC------
AAAATATGCATAATAAA
 A C G T C G T A T C A G T G C A A C G T C T A G C A G T T C A G G T A C C T G A G A T C A C G T A C G T A C G T A C G T A C G T A C G T
G C T A G C T A C T A G C G T A G A C T G C T A G A C T C A T G G T A C C T G A C G A T C G T A G C T A C A G T C T G A C G T A C G T A

Gata1/MA0035.3/Jaspar

Match Rank:7
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--ARAKRKGCAC
ANAGATAAGAA-
 A C G T A C G T C G T A T C A G T G C A A C G T C T A G C A G T T C A G G T A C C T G A G A T C
C T G A T A G C C G T A A C T G C G T A A C G T C G T A C T G A T C A G T C G A T C G A A C G T

SpiB(ETS)/OCILY3-SPIB-ChIP-Seq(GSE56857)/Homer

Match Rank:8
Score:0.52
Offset:0
Orientation:forward strand
Alignment:ARAKRKGCAC--
AAAGRGGAAGTG
 C G T A T C A G T G C A A C G T C T A G C A G T T C A G G T A C C T G A G A T C A C G T A C G T
C G T A C T G A C G T A C T A G T C G A C T A G A C T G C G T A C G T A T A C G A G C T A T C G

PB0099.1_Zfp691_1/Jaspar

Match Rank:9
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-ARAKRKGCAC------
NNNNTGAGCACTGTNNG
 A C G T C G T A T C A G T G C A A C G T C T A G C A G T T C A G G T A C C T G A G A T C A C G T A C G T A C G T A C G T A C G T A C G T
G C T A G A C T C G T A T C A G A C G T A C T G C T G A A C T G A G T C C G T A G T A C A G C T C A T G A G C T C A G T G T A C T C A G

E2F2/MA0864.1/Jaspar

Match Rank:10
Score:0.52
Offset:0
Orientation:forward strand
Alignment:ARAKRKGCAC------
AAAATGGCGCCATTTT
 C G T A T C A G T G C A A C G T C T A G C A G T T C A G G T A C C T G A G A T C A C G T A C G T A C G T A C G T A C G T A C G T
C G T A C G T A C G T A C G T A C G A T A T C G A C T G A G T C A C T G A G T C A T G C G C T A G C A T C G A T C G A T G C A T