Information for 4-AATGGGGATTTCC (Motif 6)

G T C A C T G A C G A T A C T G A C T G A C T G A C T G C G T A A C G T A C G T A C G T A G T C G T A C
Reverse Opposite:
A C T G A C T G C G T A C G T A C G T A A C G T A G T C G T A C G T A C A G T C C G T A A G C T A C G T
p-value:1e-12
log p-value:-2.910e+01
Information Content per bp:1.858
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.84%
Number of Background Sequences with motif3.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets48.4 +/- 20.5bp
Average Position of motif in Background59.4 +/- 10.7bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MF0003.1_REL_class/Jaspar

Match Rank:1
Score:0.83
Offset:3
Orientation:forward strand
Alignment:AATGGGGATTTCC
---GGGGATTTCC
 G T C A C T G A C G A T A C T G A C T G A C T G A C T G C G T A A C G T A C G T A C G T A G T C G T A C
A C G T A C G T A C G T A T C G A C T G C A T G C T A G G C T A C G A T A G C T G A C T G A T C G T A C

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:2
Score:0.81
Offset:2
Orientation:forward strand
Alignment:AATGGGGATTTCC-
--NGGGGATTTCCC
 G T C A C T G A C G A T A C T G A C T G A C T G A C T G C G T A A C G T A C G T A C G T A G T C G T A C A C G T
A C G T A C G T C G T A C A T G C A T G A C T G C T A G T C G A G C A T C G A T A G C T A G T C G A T C G T A C

RELA/MA0107.1/Jaspar

Match Rank:3
Score:0.80
Offset:3
Orientation:forward strand
Alignment:AATGGGGATTTCC
---GGGAATTTCC
 G T C A C T G A C G A T A C T G A C T G A C T G A C T G C G T A A C G T A C G T A C G T A G T C G T A C
A C G T A C G T A C G T A T C G A C T G A C T G C T G A T C G A C G A T A C G T A G C T A G T C A G T C

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:4
Score:0.79
Offset:3
Orientation:reverse strand
Alignment:AATGGGGATTTCC
---GGGAATTTCC
 G T C A C T G A C G A T A C T G A C T G A C T G A C T G C G T A A C G T A C G T A C G T A G T C G T A C
A C G T A C G T A C G T A C T G C T A G A C T G C T G A T C G A C G A T A G C T C G A T G T A C G T A C

REL/MA0101.1/Jaspar

Match Rank:5
Score:0.78
Offset:3
Orientation:forward strand
Alignment:AATGGGGATTTCC
---GGGGATTTCC
 G T C A C T G A C G A T A C T G A C T G A C T G A C T G C G T A A C G T A C G T A C G T A G T C G T A C
A C G T A C G T A C G T A T C G A C T G C A T G C T A G G T C A C G A T C G A T C G A T A G T C G T A C

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:6
Score:0.70
Offset:3
Orientation:reverse strand
Alignment:AATGGGGATTTCC--
---GGGGATTCCCCC
 G T C A C T G A C G A T A C T G A C T G A C T G A C T G C G T A A C G T A C G T A C G T A G T C G T A C A C G T A C G T
A C G T A C G T A C G T A C T G C T A G C A T G T C A G G C T A G A C T A G C T A G T C A G T C G A T C G A T C A G T C

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.68
Offset:0
Orientation:forward strand
Alignment:AATGGGGATTTCC
NNTGTGGATTSS-
 G T C A C T G A C G A T A C T G A C T G A C T G A C T G C G T A A C G T A C G T A C G T A G T C G T A C
C A T G G A C T G C A T A C T G A G C T A C T G A C T G C G T A G C A T A G C T A T C G T A C G A C G T

NFKB2/MA0778.1/Jaspar

Match Rank:8
Score:0.68
Offset:2
Orientation:forward strand
Alignment:AATGGGGATTTCC--
--AGGGGATTCCCCT
 G T C A C T G A C G A T A C T G A C T G A C T G A C T G C G T A A C G T A C G T A C G T A G T C G T A C A C G T A C G T
A C G T A C G T T G C A T C A G A C T G C A T G C T A G T G C A G C A T G A C T G A T C G T A C G A T C G A T C A G C T

FOXH1/MA0479.1/Jaspar

Match Rank:9
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:AATGGGGATTTCC
--TGTGGATTNNN
 G T C A C T G A C G A T A C T G A C T G A C T G A C T G C G T A A C G T A C G T A C G T A G T C G T A C
A C G T A C G T C G A T A C T G A C G T A C T G C A T G C G T A G C A T A C G T A T C G T C A G T C G A

NFKB1/MA0105.4/Jaspar

Match Rank:10
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:AATGGGGATTTCC--
--AGGGGATTCCCCT
 G T C A C T G A C G A T A C T G A C T G A C T G A C T G C G T A A C G T A C G T A C G T A G T C G T A C A C G T A C G T
A C G T A C G T T G C A C T A G C A T G C A T G C T A G T C G A G C A T A G C T G A T C G T A C T A G C G A T C A C G T