Information for 18-GCGCATGCGC (Motif 28)

A C T G A G T C C T A G A G T C T C G A A C G T A T C G A G T C A C T G A G T C
Reverse Opposite:
C T A G G T A C A C T G A T G C C G T A A G C T A C T G G A T C A C T G A G T C
p-value:1e-6
log p-value:-1.600e+01
Information Content per bp:1.854
Number of Target Sequences with motif25.0
Percentage of Target Sequences with motif3.00%
Number of Background Sequences with motif398.7
Percentage of Background Sequences with motif0.85%
Average Position of motif in Targets44.2 +/- 28.9bp
Average Position of motif in Background47.5 +/- 39.7bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NRF(NRF)/Promoter/Homer

Match Rank:1
Score:0.95
Offset:-2
Orientation:forward strand
Alignment:--GCGCATGCGC
GTGCGCATGCGC
 A C G T A C G T A C T G A G T C C T A G A G T C T C G A A C G T A T C G A G T C A C T G A G T C
A T C G A G C T A C T G A G T C A C T G A G T C C G T A A C G T A C T G A G T C A C T G A G T C

NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.94
Offset:0
Orientation:reverse strand
Alignment:GCGCATGCGC--
GCGCATGCGCAG
 A C T G A G T C C T A G A G T C T C G A A C G T A T C G A G T C A C T G A G T C A C G T A C G T
T C A G T G A C C T A G T A G C T G C A A C G T T A C G A G T C A C T G A G T C T C G A T A C G

NRF1/MA0506.1/Jaspar

Match Rank:3
Score:0.94
Offset:0
Orientation:forward strand
Alignment:GCGCATGCGC-
GCGCCTGCGCA
 A C T G A G T C C T A G A G T C T C G A A C G T A T C G A G T C A C T G A G T C A C G T
T C A G G T A C T C A G A T G C T G A C A C G T A C T G A G T C A T C G G T A C T C G A

PB0095.1_Zfp161_1/Jaspar

Match Rank:4
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--GCGCATGCGC----
TGGCGCGCGCGCCTGA
 A C G T A C G T A C T G A G T C C T A G A G T C T C G A A C G T A T C G A G T C A C T G A G T C A C G T A C G T A C G T A C G T
C A G T C T A G C T A G A T G C T C A G G A T C C T A G A G T C C T A G A G T C C T A G G A T C G A T C G A C T C T A G C G T A

Hes1/MA1099.1/Jaspar

Match Rank:5
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GCGCATGCGC
NNCGCGTGNN-
 A C G T A C T G A G T C C T A G A G T C T C G A A C G T A T C G A G T C A C T G A G T C
C A T G C T G A T G A C C T A G A G T C T C A G G A C T C T A G A T G C A T G C A C G T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:6
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--GCGCATGCGC
SNGCACCTGCHS
 A C G T A C G T A C T G A G T C C T A G A G T C T C G A A C G T A T C G A G T C A C T G A G T C
T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C

bHLHE40(bHLH)/HepG2-BHLHE40-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--GCGCATGCGC
NGKCACGTGM--
 A C G T A C G T A C T G A G T C C T A G A G T C T C G A A C G T A T C G A G T C A C T G A G T C
T C G A T C A G C A T G A G T C C G T A A G T C C T A G A C G T A C T G G T A C A C G T A C G T

HEY1/MA0823.1/Jaspar

Match Rank:8
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GCGCATGCGC
GGCACGTGTC-
 A C G T A C T G A G T C C T A G A G T C T C G A A C G T A T C G A G T C A C T G A G T C
A C T G T C A G G A T C T C G A A T G C A C T G A G C T T C A G A G C T A T G C A C G T

Tcfl5/MA0632.1/Jaspar

Match Rank:9
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GCGCATGCGC
GGCACGTGCC-
 A C G T A C T G A G T C C T A G A G T C T C G A A C G T A T C G A G T C A C T G A G T C
C T A G A C T G G T A C C T G A A G T C T C A G G A C T C A T G T G A C G A T C A C G T

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:10
Score:0.55
Offset:1
Orientation:forward strand
Alignment:GCGCATGCGC
-TGCGTG---
 A C T G A G T C C T A G A G T C T C G A A C G T A T C G A G T C A C T G A G T C
A C G T G A C T A C T G A G T C A C T G A C G T A C T G A C G T A C G T A C G T