Information for 15-CNGMAATGGT (Motif 25)

G T A C A C G T C T A G G T A C C G T A C G T A A C G T C T A G C T A G A C G T
Reverse Opposite:
C G T A A G T C A G T C C G T A A C G T A C G T A C T G A G T C T G C A A C T G
p-value:1e-7
log p-value:-1.755e+01
Information Content per bp:1.807
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif1.92%
Number of Background Sequences with motif150.1
Percentage of Background Sequences with motif0.32%
Average Position of motif in Targets58.5 +/- 22.2bp
Average Position of motif in Background53.3 +/- 29.6bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0165.1_Sox11_2/Jaspar

Match Rank:1
Score:0.66
Offset:2
Orientation:forward strand
Alignment:CNGMAATGGT------
--AAAATTGTTATGAA
 G T A C A C G T C T A G G T A C C G T A C G T A A C G T C T A G C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G T A C T G A C T G A C T G A A C G T G A C T T C A G C G A T G A C T G C T A C A G T T C A G C T G A C G T A

Sox11/MA0869.1/Jaspar

Match Rank:2
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----CNGMAATGGT-
AACACTGAAATTGTT
 A C G T A C G T A C G T A C G T G T A C A C G T C T A G G T A C C G T A C G T A A C G T C T A G C T A G A C G T A C G T
T C G A C G T A A G T C G T C A G T A C A C G T C T A G G T C A C T G A C G T A A C G T A C G T A C T G A C G T A C G T

PB0175.1_Sox4_2/Jaspar

Match Rank:3
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-CNGMAATGGT------
GGAAAAATTGTTAGGAA
 A C G T G T A C A C G T C T A G G T A C C G T A C G T A A C G T C T A G C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T A C G T C A G G C T A C G T A C T G A C T G A C T G A A G C T C G A T T C A G C G A T G A C T C T G A T A C G C T A G C T G A C T G A

SOX4/MA0867.1/Jaspar

Match Rank:4
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----CNGMAATGGT--
AACACTGCAATTGTTC
 A C G T A C G T A C G T A C G T G T A C A C G T C T A G G T A C C G T A C G T A A C G T C T A G C T A G A C G T A C G T A C G T
C G T A C T G A A G T C G T C A G T A C A G C T A C T G G T A C G T C A G T C A G A C T A G C T A C T G A G C T A C G T G A T C

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:5
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:CNGMAATGGT
-RACAAWGG-
 G T A C A C G T C T A G G T A C C G T A C G T A A C G T C T A G C T A G A C G T
A C G T T C G A G T C A T G A C C G T A C G T A C G T A C T A G T A C G A C G T

PB0132.1_Hbp1_2/Jaspar

Match Rank:6
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---CNGMAATGGT----
NNTNNACAATGGGANNN
 A C G T A C G T A C G T G T A C A C G T C T A G G T A C C G T A C G T A A C G T C T A G C T A G A C G T A C G T A C G T A C G T A C G T
C G T A T A C G A G C T C G T A A G T C G T C A G T A C C G T A C G T A C G A T C T A G C T A G A C T G T C G A G T C A G A T C G C T A

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:7
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CNGMAATGGT
VRAACAATGG-
 A C G T G T A C A C G T C T A G G T A C C G T A C G T A A C G T C T A G C T A G A C G T
T G A C C T G A T C G A C G T A T A G C G T C A T C G A G C A T C T A G T A C G A C G T

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:8
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CNGMAATGGT
CCAAAAATAG-
 A C G T G T A C A C G T C T A G G T A C C G T A C G T A A C G T C T A G C T A G A C G T
G T A C G A C T C G T A C T G A T C G A C G T A G C T A C A G T C T G A T A C G A C G T

Barx1(Homeobox)/Stomach-Barx1.3xFlag-ChIP-Seq(GSE69483)/Homer

Match Rank:9
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:CNGMAATGGT--
--NTAATKGTTT
 G T A C A C G T C T A G G T A C C G T A C G T A A C G T C T A G C T A G A C G T A C G T A C G T
A C G T A C G T A G T C G C A T T C G A T C G A C A G T C A T G T A C G G A C T G A C T A G C T

SOX9/MA0077.1/Jaspar

Match Rank:10
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CNGMAATGGT
GAACAATGG-
 G T A C A C G T C T A G G T A C C G T A C G T A A C G T C T A G C T A G A C G T
C T A G C G T A G C T A A G T C G C T A G C T A C G A T C T A G T A C G A C G T